Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 4.0e-99 364.8 185 100.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 8.1e-60 234.2 128 89.1
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 4.0e-59 231.9 183 67.2
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.0e-58 229.6 183 66.7
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 8.4e-57 224.2 198 66.2
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.1e-56 223.8 184 66.3
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.5e-56 222.6 183 66.7
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 5.5e-56 221.5 168 71.4
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 9.3e-56 220.7 179 68.7
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.2e-55 220.3 188 66.5
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.7e-55 219.2 176 63.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.7e-55 219.2 164 67.1
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 6.0e-55 218.0 127 83.5
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.8e-54 216.5 189 62.4
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.8e-54 216.5 174 68.4
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.3e-54 216.1 185 62.2
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.3e-54 216.1 176 63.1
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 3.9e-54 215.3 208 59.6
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 5.1e-54 214.9 146 71.9
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 5.1e-54 214.9 185 61.6
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 6.7e-54 214.5 158 70.9
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.5e-53 213.4 187 62.6
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 1.9e-53 213.0 195 63.6
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 3.3e-53 212.2 187 64.2
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.3e-53 212.2 191 60.7
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 7.4e-53 211.1 147 70.7
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 7.4e-53 211.1 184 62.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.3e-52 210.3 160 68.1
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.8e-52 209.1 129 81.4
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 3.7e-52 208.8 151 71.5
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 3.7e-52 208.8 201 58.2
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 8.2e-52 207.6 147 73.5
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.4e-51 206.1 153 69.3
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 2.4e-51 206.1 176 63.1
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.4e-51 206.1 140 75.7
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 4.1e-51 205.3 195 62.1
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 9.0e-51 204.1 163 68.1
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 9.0e-51 204.1 139 75.5
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.5e-50 203.4 152 69.1
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.5e-50 203.4 160 65.6
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.0e-50 203.0 157 66.2
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 4.5e-50 201.8 187 55.1
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 4.5e-50 201.8 175 60.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 7.6e-50 201.1 148 69.6
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.0e-49 200.7 197 57.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.0e-49 200.7 159 66.7
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.7e-49 199.9 179 60.9
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.7e-49 199.9 142 69.7
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 2.9e-49 199.1 124 79.8
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.8e-49 198.7 111 87.4
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 6.5e-49 198.0 123 77.2
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 6.5e-49 198.0 187 61.0
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 8.5e-49 197.6 134 72.4
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.9e-48 196.4 188 54.8
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 2.5e-48 196.1 187 60.4
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 2.5e-48 196.1 188 58.0
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 4.2e-48 195.3 141 69.5
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 5.5e-48 194.9 173 61.3
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 7.2e-48 194.5 148 66.2
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.7e-47 192.6 177 60.5
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 2.7e-47 192.6 184 57.6
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 6.1e-47 191.4 188 55.9
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 7.9e-47 191.0 152 62.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.8e-46 189.9 180 56.1
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 3.9e-46 188.7 132 67.4
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 5.1e-46 188.3 164 61.6
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-45 187.2 190 54.7
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-45 187.2 188 55.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.1e-45 187.2 188 55.9
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.5e-45 186.8 190 57.9
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.9e-45 186.4 120 74.2
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.5e-45 186.0 124 73.4
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 5.7e-45 184.9 133 70.7
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 1.6e-44 183.3 170 57.1
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.6e-44 183.3 127 69.3
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 6.3e-44 181.4 128 68.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 8.2e-44 181.0 146 65.1
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.4e-43 179.5 141 64.5
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.9e-43 177.9 170 55.3
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 9.1e-43 177.6 135 65.2
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 9.1e-43 177.6 124 68.5
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.5e-42 176.8 156 55.1
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 3.4e-42 175.6 131 64.1
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 4.5e-42 175.3 141 61.7
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 4.5e-42 175.3 141 61.7
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 4.5e-42 175.3 141 61.7
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 4.5e-42 175.3 141 61.7
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 4.5e-42 175.3 141 61.7
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 4.5e-42 175.3 121 71.9
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.3e-41 173.7 135 64.4
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-41 173.3 131 63.4
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.7e-41 173.3 131 63.4
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.7e-41 173.3 104 77.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.5e-41 171.0 134 62.7
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 8.5e-41 171.0 135 63.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.2e-40 168.7 136 61.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 7.9e-39 164.5 135 57.8
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.8e-38 163.3 118 66.1
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.8e-35 153.3 134 56.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 3.1e-35 152.5 119 62.2
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.0e-29 133.3 104 63.5
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.0e-29 133.3 104 63.5
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.0e-29 133.3 104 63.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 2.4e-27 126.3 78 82.1
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 4.5e-26 122.1 107 67.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 5.9e-26 121.7 183 40.4
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.6e-23 112.5 132 46.2
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 4.7e-23 112.1 126 47.6
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 4.0e-22 109.0 80 62.5
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.8e-20 102.8 129 47.3
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.6e-18 97.1 70 72.9
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 6.5e-17 91.7 114 41.2
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.0e-13 80.1 50 66.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 3.2e-08 62.8 131 32.1
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 1.8e-06 57.0 41 53.7


User provided reference genes

Program Settings