Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 1.4e-142 509.6 261 100.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.0e-108 397.1 269 80.7
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 3.3e-107 392.1 267 80.9
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.4e-105 386.0 276 75.4
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.4e-104 382.1 269 77.3
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.4e-102 376.7 275 76.4
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 3.5e-101 372.1 271 76.0
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 3.5e-101 372.1 267 78.3
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.3e-100 370.2 277 74.0
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.1e-99 367.1 276 73.9
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.5e-99 366.7 246 79.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.6e-98 363.2 284 71.5
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 4.8e-98 361.7 271 73.1
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 6.2e-98 361.3 275 73.1
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 9.0e-97 357.5 275 72.4
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.5e-96 356.7 285 70.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.5e-96 356.7 272 73.5
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.6e-96 355.9 267 73.4
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 4.5e-96 355.1 280 72.5
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 7.6e-96 354.4 276 70.3
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 7.6e-96 354.4 276 70.3
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.3e-95 353.6 267 72.3
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.2e-95 352.8 275 70.2
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 6.5e-95 351.3 279 71.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 8.4e-95 350.9 279 71.0
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.1e-94 350.5 274 69.7
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 9.3e-94 347.4 265 74.3
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.3e-94 347.4 267 72.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 9.3e-94 347.4 267 72.3
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.1e-93 346.3 268 71.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.6e-93 345.1 268 71.6
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.0e-92 342.4 262 68.7
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 3.0e-92 342.4 267 71.9
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.1e-91 340.5 264 69.7
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.5e-91 340.1 275 72.7
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 2.5e-91 339.3 262 70.2
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 2.5e-91 339.3 265 72.1
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.5e-91 339.3 261 70.9
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.5e-91 339.3 274 71.5
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 4.3e-91 338.6 275 70.5
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.6e-90 336.7 275 70.9
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.8e-90 335.9 273 69.2
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.8e-90 335.1 266 68.0
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 6.3e-90 334.7 201 85.6
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 8.2e-90 334.3 266 70.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.4e-89 333.6 187 89.3
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.8e-89 333.2 271 67.9
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.8e-89 333.2 266 70.7
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.4e-89 332.8 273 67.8
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.1e-89 332.0 275 70.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 5.3e-89 331.6 266 69.2
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 9.0e-89 330.9 270 70.4
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.2e-88 330.5 275 69.8
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.5e-88 330.1 271 69.4
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.5e-88 330.1 268 70.5
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.6e-88 329.3 264 70.5
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 3.4e-88 328.9 268 70.5
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.5e-88 328.6 271 69.7
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 5.9e-88 328.2 268 67.2
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.9e-88 328.2 265 69.4
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 7.6e-88 327.8 231 77.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.3e-87 327.0 269 65.8
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.7e-87 326.6 188 88.3
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.2e-87 326.2 266 68.4
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.2e-87 326.2 264 70.8
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.9e-87 325.9 263 68.4
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.1e-86 323.9 261 70.9
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.9e-86 323.2 267 68.9
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.9e-86 323.2 192 86.5
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.5e-86 322.8 289 66.8
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.2e-86 322.4 222 77.5
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 3.2e-86 322.4 275 66.5
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.2e-86 322.0 196 86.2
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 5.5e-86 321.6 236 74.2
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 7.2e-86 321.2 189 86.8
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 9.3e-86 320.9 265 68.7
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.6e-85 320.1 234 71.8
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 2.1e-85 319.7 275 66.5
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 2.1e-85 319.7 275 66.5
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.1e-85 319.7 276 68.5
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.1e-85 319.7 264 69.7
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.7e-85 319.3 269 66.9
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.5e-85 318.9 273 65.9
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.3e-84 317.0 269 65.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.3e-84 317.0 274 66.8
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.3e-84 317.0 266 68.4
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 3.0e-84 315.8 192 86.5
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 3.9e-84 315.5 283 65.0
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 3.9e-84 315.5 279 63.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 5.1e-84 315.1 269 64.3
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 8.7e-84 314.3 269 65.8
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 8.7e-84 314.3 279 65.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.9e-83 313.2 269 65.4
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 3.3e-83 312.4 269 64.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 4.3e-83 312.0 273 66.7
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.0e-80 303.1 263 65.4
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 3.8e-79 298.9 191 77.0
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 5.5e-78 295.0 186 78.0
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.7e-77 292.7 273 63.4
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 6.7e-76 288.1 264 63.6
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.8e-74 282.0 219 71.2
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.4e-73 279.6 196 68.9
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 3.6e-69 265.8 188 68.1
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.6e-67 259.6 232 64.2
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 6.3e-66 255.0 236 58.9
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 4.5e-64 248.8 200 66.5
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 2.2e-63 246.5 205 61.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 6.7e-60 235.0 271 55.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 7.0e-57 224.9 213 65.3
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.0e-56 223.4 205 63.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.2e-50 203.4 196 51.5
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.2e-48 197.6 203 57.6
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.3e-47 194.1 110 86.4
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.1e-46 191.0 199 51.3
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.1e-45 186.8 133 70.7
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 3.6e-45 186.0 110 80.0
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 2.9e-39 166.4 188 47.3
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.6e-31 138.7 131 66.4
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 4.4e-27 125.9 142 52.1
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 6.0e-16 89.0 71 64.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.6e-13 80.9 93 53.8
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-12 77.8 49 73.5
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.1e-09 68.2 44 75.0
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 4.6e-08 62.8 43 65.1
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.3e-07 60.5 65 53.8


User provided reference genes

Program Settings