Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 4.7e-103 377.9 190 100.0
TAR622G0830 Trochodendron aralioides HOM05D005252 ORTHO05D006788 4.7e-103 377.9 190 100.0
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 1.6e-71 273.1 194 70.1
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 1.6e-71 273.1 194 70.1
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.1e-67 260.4 191 67.5
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 4.1e-67 258.5 190 67.9
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 9.2e-67 257.3 190 65.3
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 2.1e-66 256.1 188 66.5
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 4.6e-66 255.0 191 66.5
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.3e-65 253.4 200 64.0
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 6.6e-65 251.1 186 66.1
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 2.8e-63 245.7 190 64.7
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 4.7e-63 245.0 192 65.6
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 8.1e-63 244.2 192 63.0
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 1.4e-62 243.4 190 64.7
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 3.1e-62 242.3 189 63.5
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 3.1e-62 242.3 188 66.0
CDE04G0131 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 5.2e-62 241.5 189 59.8
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 6.8e-62 241.1 192 62.5
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 8.9e-62 240.7 184 63.0
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 1.2e-61 240.4 194 63.4
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 1.5e-61 240.0 191 62.8
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 7.6e-61 237.7 190 60.5
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 7.6e-61 237.7 193 63.2
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 9.9e-61 237.3 191 62.8
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 3.8e-60 235.3 192 61.5
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 6.4e-60 234.6 190 58.9
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 8.4e-60 234.2 189 58.7
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 3.2e-59 232.3 191 60.7
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 4.2e-59 231.9 189 61.4
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 4.2e-59 231.9 189 61.9
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 9.3e-59 230.7 191 59.7
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 1.2e-58 230.3 190 57.9
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.6e-58 229.9 191 59.7
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 2.7e-58 229.2 192 57.3
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 6.0e-58 228.0 190 58.4
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 7.8e-58 227.6 189 58.7
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 1.0e-57 227.3 192 57.3
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 2.3e-57 226.1 191 58.1
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 3.0e-57 225.7 181 61.3
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 8.7e-57 224.2 191 59.7
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 8.7e-57 224.2 190 61.1
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 1.1e-56 223.8 188 60.1
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 1.9e-56 223.0 191 56.5
ATR0807G108 Amborella trichopoda HOM05D005252 ORTHO05D006788 2.5e-56 222.6 191 58.6
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 2.5e-56 222.6 192 56.8
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 5.6e-56 221.5 193 56.5
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 9.6e-56 220.7 191 56.0
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.3e-55 220.3 189 56.6
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 1.3e-55 220.3 191 56.0
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 1.3e-55 220.3 187 57.8
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 1.3e-55 220.3 192 55.7
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 1.6e-55 219.9 192 56.8
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 2.8e-55 219.2 191 56.0
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 3.6e-55 218.8 191 56.0
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 4.8e-55 218.4 191 56.5
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 4.8e-55 218.4 191 55.5
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 4.8e-55 218.4 192 55.7
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 6.2e-55 218.0 191 56.0
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 8.1e-55 217.6 189 56.1
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 1.4e-54 216.9 191 55.0
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 2.4e-54 216.1 188 57.4
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 4.0e-54 215.3 191 54.5
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 4.0e-54 215.3 191 55.5
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 5.3e-54 214.9 184 57.1
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 5.3e-54 214.9 190 56.8
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 1.2e-53 213.8 191 54.5
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 1.5e-53 213.4 188 56.4
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 2.6e-53 212.6 190 55.8
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 5.8e-53 211.5 199 55.3
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 9.9e-53 210.7 190 55.3
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 1.3e-52 210.3 191 54.5
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 2.2e-52 209.5 190 56.3
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 4.9e-52 208.4 191 53.9
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.1e-51 207.2 201 54.7
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 1.9e-51 206.5 194 53.1
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 2.4e-51 206.1 197 54.3
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 3.2e-51 205.7 206 50.0
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 3.2e-51 205.7 198 53.5
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 7.1e-51 204.5 190 54.2
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 7.1e-51 204.5 192 53.1
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 9.3e-51 204.1 190 54.2
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 1.6e-50 203.4 190 54.2
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.3e-49 200.3 154 63.0
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 3.9e-49 198.7 190 52.1
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.9e-48 196.4 200 53.5
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 4.3e-48 195.3 189 51.9
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 4.3e-48 195.3 191 52.9
MELO3C020240.2 Cucumis melo HOM05D005252 ORTHO05D006788 2.8e-47 192.6 189 53.4
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 3.6e-47 192.2 189 52.4
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 5.3e-46 188.3 185 50.8
Nitab4.5_0009456g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.5e-45 186.8 191 50.3
Mapoly0060s0113 Marchantia polymorpha HOM05D005252 ORTHO05D006788 2.0e-45 186.4 182 52.7
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 9.9e-45 184.1 145 64.1
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.3e-44 183.7 187 50.8
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 1.6e-39 166.8 192 47.9
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 4.8e-39 165.2 193 49.7
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 2.4e-38 162.9 118 67.8
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 2.0e-37 159.8 146 57.5
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 2.2e-36 156.4 194 44.8
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 4.2e-35 152.1 156 50.0
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 4.6e-34 148.7 190 44.7
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 3.9e-33 145.6 194 44.3
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 6.7e-33 144.8 118 55.9
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 4.3e-32 142.1 118 56.8
DCAR_003402 Daucus carota HOM05D005252 ORTHO05D006788 2.6e-29 132.9 190 41.6
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 4.2e-27 125.6 91 63.7
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 4.2e-27 125.6 181 38.1
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 7.2e-27 124.8 91 59.3
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 1.3e-25 120.6 90 57.8
Gohir.A01G173232 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.3e-25 119.8 92 55.4
Gohir.A02G112713 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.9e-24 116.7 92 52.2
Gohir.A06G122900 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.5e-24 116.3 92 52.2
Gohir.A08G081162 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.3e-24 115.9 92 54.3
Gohir.A01G088400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.8e-23 112.8 92 52.2
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 1.1e-22 110.9 92 55.4
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 6.5e-20 101.7 154 37.0
SEGI_29343 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 4.2e-19 99.0 92 57.6
Gohir.A11G239440 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.6e-18 97.1 73 56.2
CSS0015528 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.5e-16 89.7 75 61.3
AagrBONN_evm.TU.Sc2ySwM_344.1682 Anthoceros agrestis HOM05D005252 ORTHO05D006788 1.3e-15 87.4 103 46.6
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 1.3e-15 87.4 109 37.6
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 2.8e-15 86.3 113 46.9
CSS0049209 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.7e-15 85.9 69 59.4
Gohir.A13G083166 Gossypium hirsutum HOM05D005252 ORTHO05D006788 8.2e-15 84.7 89 44.9
MCO06G238 Micromonas commoda HOM05D005252 ORTHO05D006788 9.1e-14 81.3 147 32.0
PRCOL_00004140 Prasinoderma coloniale HOM05D005252 ORTHO05D006788 9.1e-14 81.3 198 28.8
Gohir.A07G145950 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.4e-11 73.9 60 58.3
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 3.2e-11 72.8 47 68.1
Oeu024984.1 Olea europaea HOM05D005252 ORTHO05D006788 1.2e-10 70.9 47 61.7
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 7.4e-08 61.6 102 38.2
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.7e-07 60.5 43 58.1
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.7e-07 60.5 185 31.4
Pp3c10_18400 Physcomitrium patens HOM05D005656 ORTHO05D007094 2.2e-07 60.1 130 30.0
Os09g0411650 Oryza sativa ssp. japonica HOM05D005456 ORTHO05D006805 3.1e-06 56.2 188 25.0
Pp3c3_30340 Physcomitrium patens HOM05D005656 ORTHO05D007094 3.1e-06 56.2 130 28.5
Peaxi162Scf00080g00211 Petunia axillaris HOM05D005656 ORTHO05D007094 4.1e-06 55.8 170 24.7
AagrBONN_evm.TU.Sc2ySwM_117.3449 Anthoceros agrestis HOM05D005656 ORTHO05D007094 9.1e-06 54.7 101 30.7


User provided reference genes

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