Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.0e-32 139.8 71 100.0
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.1e-31 137.9 71 98.6
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.1e-20 100.9 74 74.3
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.8e-19 96.7 71 67.6
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.3e-17 90.1 78 62.8
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-15 86.3 78 61.5
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 5.2e-15 84.0 69 62.3
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.4e-14 81.3 74 60.8
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 2.4e-12 75.1 73 54.8
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 4.1e-12 74.3 75 56.0
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 5.4e-12 73.9 70 60.0
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.2e-11 72.8 77 54.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.2e-11 72.8 77 54.5
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.2e-11 72.8 68 57.4
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.7e-11 71.6 76 52.6
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 7.8e-11 70.1 73 56.2
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 7.8e-11 70.1 74 52.7
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.0e-10 69.7 78 52.6
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.0e-10 69.7 78 52.6
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 1.7e-10 68.9 69 55.1
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 2.3e-10 68.6 59 57.6
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 2.3e-10 68.6 64 57.8
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.3e-10 68.6 68 52.9
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 3.9e-10 67.8 75 52.0
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 5.1e-10 67.4 73 53.4
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 1.1e-09 66.2 73 53.4
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.1e-09 66.2 76 52.6
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 1.5e-09 65.9 73 50.7
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 3.3e-09 64.7 63 57.1
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.3e-09 64.7 74 47.3
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.3e-09 64.3 74 48.6
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 4.3e-09 64.3 72 51.4
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 5.6e-09 63.9 61 55.7
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 9.5e-09 63.2 70 47.1
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 9.5e-09 63.2 77 48.1
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 9.5e-09 63.2 77 48.1
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.1e-08 62.0 60 60.0
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.6e-08 61.2 63 54.0
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 1.4e-07 59.3 73 50.7
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 4.0e-07 57.8 69 50.7
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 6.8e-07 57.0 71 47.9
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 1.5e-06 55.8 74 47.3
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 2.0e-06 55.5 66 45.5
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 2.0e-06 55.5 77 49.4
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 3.4e-06 54.7 63 52.4
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 3.4e-06 54.7 65 49.2
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.4e-06 54.7 75 44.0
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.4e-06 54.3 75 45.3
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 5.8e-06 53.9 77 48.1
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 7.6e-06 53.5 66 43.9
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 9.9e-06 53.1 66 43.9


User provided reference genes

Program Settings