Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 0.0e+00 1315.1 675 100.0
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.3e-301 1039.3 673 78.9
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 2.7e-294 1015.0 673 75.8
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 4.7e-291 1004.2 674 75.2
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 1.1e-282 976.5 646 75.4
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 7.9e-278 960.3 669 71.6
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 1.0e-277 959.9 645 73.8
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 8.7e-277 956.8 673 71.5
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 2.5e-276 955.3 647 71.9
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 7.3e-276 953.7 673 70.7
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 9.6e-276 953.4 673 71.3
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.6e-275 952.6 673 71.0
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 4.8e-275 951.0 665 72.2
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 4.8e-275 951.0 673 70.7
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 1.1e-274 949.9 673 70.9
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 3.1e-274 948.3 666 70.9
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 1.2e-273 946.4 673 70.1
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 7.6e-273 943.7 673 70.3
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 9.9e-273 943.3 643 72.8
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 2.2e-272 942.2 673 70.0
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 8.4e-272 940.3 673 69.8
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 2.1e-270 935.6 673 69.7
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 4.6e-270 934.5 673 68.6
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 4.6e-270 934.5 667 70.5
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 1.0e-269 933.3 704 66.8
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 3.0e-269 931.8 669 69.2
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 1.1e-266 923.3 661 69.6
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 4.5e-265 917.9 667 67.6
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 5.8e-265 917.5 667 70.0
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 7.6e-265 917.1 670 67.5
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 2.9e-264 915.2 667 68.4
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 1.1e-263 913.3 649 72.0
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 3.2e-263 911.8 671 67.1
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 1.6e-262 909.4 680 67.5
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 2.1e-262 909.1 664 69.6
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 3.5e-262 908.3 648 68.4
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 1.8e-261 906.0 666 67.1
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 3.3e-260 901.7 690 65.5
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 3.3e-260 901.7 668 66.9
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 1.6e-259 899.4 668 68.0
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 5.3e-258 894.4 667 66.7
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 5.3e-258 894.4 673 67.0
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 9.0e-258 893.6 668 67.7
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 2.0e-257 892.5 669 66.7
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 4.5e-257 891.3 669 67.9
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 1.0e-256 890.2 677 66.0
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 2.2e-256 889.0 669 67.6
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 5.0e-256 887.9 669 65.9
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 8.4e-256 887.1 734 62.9
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 1.1e-255 886.7 643 68.3
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 4.2e-255 884.8 647 68.5
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 1.2e-254 883.2 703 66.3
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 3.0e-253 878.6 693 64.2
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 6.7e-253 877.5 671 66.5
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 8.7e-253 877.1 632 69.8
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 5.7e-252 874.4 722 62.3
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 1.6e-251 872.8 674 67.2
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 1.8e-250 869.4 670 64.6
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 6.5e-248 860.9 670 67.3
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 6.5e-248 860.9 695 62.4
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.9e-247 859.4 673 65.7
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 1.2e-246 856.7 669 64.0
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 2.7e-246 855.5 669 64.3
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 3.6e-246 855.1 681 63.4
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 3.6e-246 855.1 673 65.2
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 3.6e-246 855.1 674 64.8
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 7.9e-246 854.0 682 63.0
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 1.1e-244 850.1 669 63.2
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 1.3e-243 846.7 670 64.2
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 6.3e-243 844.3 671 63.5
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 1.1e-242 843.6 581 72.1
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 1.2e-241 840.1 634 65.0
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 2.6e-241 839.0 666 63.7
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.7e-240 836.3 579 71.3
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 3.2e-239 832.0 647 65.5
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 2.1e-238 829.3 733 58.5
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 1.1e-236 823.5 647 66.9
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 1.3e-235 820.1 695 61.4
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 1.7e-235 819.7 695 60.3
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 1.7e-235 819.7 664 62.3
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 5.3e-234 814.7 740 58.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 1.6e-233 813.1 676 62.9
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.3e-232 810.1 649 63.8
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 4.2e-231 805.1 655 62.3
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 7.2e-231 804.3 650 61.1
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 2.2e-224 782.7 572 68.4
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 9.4e-223 777.3 666 60.4
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.2e-222 776.9 665 61.5
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 6.1e-222 774.6 557 69.7
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.7e-219 765.4 673 60.5
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 2.0e-217 759.6 638 61.1
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 3.2e-215 752.3 577 65.5
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 1.2e-214 750.4 707 57.1
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 1.1e-207 727.2 666 58.0
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 1.1e-202 710.7 514 70.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 5.4e-194 681.8 624 57.4
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 1.0e-192 677.6 668 54.8
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 9.5e-191 671.0 594 58.9
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 2.5e-183 646.4 494 66.4
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 2.6e-172 609.8 664 49.5
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 3.5e-169 599.4 651 49.9
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 7.1e-146 521.9 352 74.4
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 1.1e-143 514.6 699 43.9
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 5.3e-133 479.2 561 48.7
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 2.4e-125 453.8 309 74.1
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 2.1e-97 360.9 308 59.4
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 6.8e-96 355.9 647 40.0
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 5.4e-93 346.3 355 54.9
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.2e-76 292.0 240 63.8
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 1.6e-76 291.6 666 32.6
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 2.4e-69 267.7 337 46.6
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 4.9e-54 216.9 307 38.8
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 3.9e-51 207.2 178 55.1
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 8.7e-43 179.5 313 36.1
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 4.5e-39 167.2 754 25.9
Zm00001eb289130 Zea mays HOM05D002544 ORTHO05D007856 7.9e-36 156.4 134 59.7
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 1.3e-27 129.0 191 41.4
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 7.4e-26 123.2 116 55.2
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 9.7e-26 122.9 102 58.8
CBR_g26304 Chara braunii HOM05D002544 ORTHO05D007856 1.1e-24 119.4 115 56.5
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.4e-21 109.0 95 60.0
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 5.1e-19 100.5 102 49.0
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.5e-15 89.0 70 62.9
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 2.9e-14 84.7 73 56.2
FvH4_4g11392 Fragaria vesca HOM05D000005 ORTHO05D000012 5.0e-14 84.0 50 76.0
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 1.4e-13 82.4 62 59.7
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 1.4e-13 82.4 62 59.7
FAN02G2717 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.9e-13 82.0 47 78.7
FAN12G0356 Fragaria x ananassa HOM05D002544 ORTHO05D007856 5.5e-13 80.5 47 76.6
HPP92_021313 Vanilla planifolia HOM05D002544 ORTHO05D007856 9.4e-13 79.7 65 56.9
FAN02G1722 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.6e-12 77.8 47 76.6
Gohir.A10G100500 Gossypium hirsutum HOM05D002544 ORTHO05D033931 7.4e-10 70.1 42 78.6
CSS0029470 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 1.7e-09 68.9 42 71.4
CSS0043407 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 1.7e-09 68.9 42 69.0
QL02p059474 Quercus lobata HOM05D002544 ORTHO05D007856 5.3e-08 63.9 38 71.1


User provided reference genes

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