Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.8e-85 319.3 173 100.0
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 3.3e-55 218.8 172 69.8
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 9.6e-55 217.2 172 72.1
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 2.1e-49 199.5 172 64.0
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 2.1e-49 199.5 172 64.0
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 1.5e-47 193.4 173 61.3
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.5e-47 193.4 172 61.6
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.5e-47 193.4 173 61.8
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.6e-46 189.9 173 61.3
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.6e-46 189.9 173 61.3
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 8.2e-46 187.6 172 60.5
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 2.4e-45 186.0 172 61.0
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 2.4e-45 186.0 173 59.0
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 5.3e-45 184.9 172 59.3
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 2.0e-44 183.0 172 59.9
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 8.5e-43 177.6 172 58.7
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 8.5e-43 177.6 173 58.4
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.9e-42 176.4 172 59.9
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.5e-42 176.0 172 58.1
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.2e-42 175.6 172 58.1
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 5.5e-42 174.9 172 59.3
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 1.2e-41 173.7 171 60.2
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 2.1e-41 172.9 172 57.6
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 6.1e-41 171.4 173 56.6
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.0e-40 170.6 173 57.8
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.0e-40 170.6 172 55.8
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.3e-40 169.5 172 58.1
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 3.0e-40 169.1 172 57.0
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 1.1e-39 167.2 172 57.0
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 2.5e-39 166.0 172 55.8
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 7.4e-39 164.5 172 55.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 9.7e-39 164.1 172 54.1
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 9.7e-39 164.1 169 53.3
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.8e-38 162.5 173 56.6
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 6.3e-38 161.4 172 54.7
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 8.2e-38 161.0 172 51.7
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 1.4e-37 160.2 172 54.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.8e-37 159.8 185 53.0
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 5.3e-37 158.3 169 50.3
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 9.1e-37 157.5 169 51.5
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 3.4e-36 155.6 171 51.5
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 5.9e-36 154.8 171 51.5
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 1.7e-35 153.3 169 49.7
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 2.2e-35 152.9 172 50.6
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 2.1e-33 146.4 173 50.3
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 7.9e-33 144.4 172 48.8
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.5e-31 140.2 173 49.7
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.6e-31 139.4 172 51.7
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.3e-30 137.1 172 51.7
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 2.2e-30 136.3 172 48.8
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 4.8e-30 135.2 152 51.3
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 8.2e-30 134.4 173 45.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.8e-29 133.3 172 48.3
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 7.0e-29 131.3 173 49.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 4.5e-28 128.6 188 44.7
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 5.9e-28 128.3 169 45.0
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 1.3e-27 127.1 171 46.8
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.9e-27 125.9 169 44.4
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 2.9e-27 125.9 110 65.5
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 5.0e-27 125.2 169 44.4
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.5e-26 123.6 172 46.5
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.2e-25 120.6 169 41.4
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 2.1e-25 119.8 172 45.3
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.0e-25 117.9 199 42.2
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 3.0e-24 115.9 169 40.8
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 3.0e-24 115.9 169 40.8
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 3.0e-24 115.9 267 33.7
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 6.7e-24 114.8 171 45.0
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 1.1e-23 114.0 207 41.1
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.5e-23 113.6 106 57.5
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 9.7e-23 110.9 169 39.1
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 9.7e-23 110.9 169 39.1
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 9.7e-23 110.9 169 39.1
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.8e-21 106.7 169 41.4
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.6e-20 103.6 172 41.3
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 1.6e-20 103.6 101 57.4
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 2.6e-20 102.8 106 55.7
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.2e-18 95.5 73 68.5
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 4.2e-18 95.5 73 68.5
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.5e-15 87.0 95 51.6
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 4.8e-14 82.0 97 49.5
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 3.1e-13 79.3 73 60.3
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 5.4e-13 78.6 57 71.9
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.2e-12 77.4 103 43.7
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.2e-11 73.2 64 62.5
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.2e-11 73.2 64 62.5
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 1.3e-06 57.4 139 28.8


User provided reference genes

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