Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 5.8e-68 260.8 133 100.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 4.8e-46 188.0 179 60.9
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.5e-44 183.0 233 51.1
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 8.2e-38 160.6 231 45.5
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.6e-36 156.4 233 44.6
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.6e-36 155.6 233 45.1
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.5e-36 155.2 233 45.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 3.5e-36 155.2 231 45.0
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 7.7e-36 154.1 233 44.6
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 7.7e-36 154.1 233 44.6
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.2e-35 152.5 231 43.7
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.5e-35 150.6 225 44.4
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 8.5e-35 150.6 230 44.3
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.1e-34 150.2 231 44.6
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.2e-34 148.7 230 44.3
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-34 148.3 234 43.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 4.2e-34 148.3 234 43.2
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 7.2e-34 147.5 232 45.3
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 3.6e-33 145.2 234 42.3
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-33 145.2 234 42.3
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 4.7e-33 144.8 238 41.2
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 6.1e-33 144.4 231 42.9
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 8.0e-33 144.1 233 41.6
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.0e-32 142.1 231 42.9
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 8.8e-32 140.6 235 42.6
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.5e-31 139.8 232 40.9
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.5e-31 139.8 240 40.4
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 2.0e-31 139.4 233 39.5
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.0e-31 139.4 238 40.3
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 4.4e-31 138.3 236 41.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.7e-31 137.1 237 43.0
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.7e-30 136.3 232 42.2
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.2e-30 136.0 238 40.3
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 8.3e-30 134.0 235 41.3
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.3e-30 134.0 233 39.1
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-29 133.7 238 40.3
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.1e-29 132.1 112 67.0
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 7.0e-29 131.0 135 54.1
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 7.0e-29 131.0 233 39.5
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 9.1e-29 130.6 238 40.3
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.6e-28 129.8 236 39.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.7e-28 129.0 231 39.0
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 2.7e-28 129.0 236 39.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 3.5e-28 128.6 230 38.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 4.5e-28 128.3 238 38.7
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.2e-27 125.9 256 38.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.9e-27 125.6 226 37.6
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.9e-27 125.6 224 38.4
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.8e-27 125.2 232 38.4
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.0e-27 124.8 200 42.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 6.5e-27 124.4 231 37.2
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 6.5e-27 124.4 228 38.2
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.5e-27 124.0 238 37.8
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.1e-26 123.6 232 37.5
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.9e-26 122.9 229 37.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.9e-26 122.9 90 70.0
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.5e-26 122.5 229 37.6
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.2e-26 122.1 101 65.3
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.2e-26 122.1 232 40.1
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.5e-26 121.3 214 37.9
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 7.2e-26 120.9 238 38.7
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.6e-25 119.8 226 36.3
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.1e-25 119.4 98 65.3
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.1e-25 119.4 236 38.1
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 2.7e-25 119.0 232 36.6
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.7e-25 119.0 233 39.1
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.6e-25 118.6 231 38.5
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.0e-25 117.5 236 38.6
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.0e-25 117.5 236 37.3
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.0e-25 117.5 228 36.4
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.0e-24 117.1 96 64.6
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-24 115.9 229 36.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.0e-24 115.5 234 36.8
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.0e-24 115.5 212 37.7
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.2e-24 114.8 230 36.1
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-24 114.4 236 35.2
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 8.8e-24 114.0 96 60.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.8e-24 114.0 212 37.3
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.5e-23 113.2 230 35.7
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.0e-23 112.8 100 62.0
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.0e-23 112.8 232 36.2
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.6e-23 112.5 231 35.5
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.4e-23 112.1 209 38.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.4e-23 112.1 157 42.0
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.4e-23 112.1 193 39.4
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 5.7e-23 111.3 236 35.6
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 7.5e-23 110.9 196 39.3
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.7e-22 108.6 234 35.9
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.1e-21 107.1 66 78.8
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 4.1e-21 105.1 99 60.6
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 5.4e-21 104.8 180 39.4
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.5e-20 102.1 188 37.8
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-19 99.8 169 37.9
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.9e-19 99.0 179 38.0
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 7.2e-18 94.4 96 57.3
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 9.5e-18 94.0 179 37.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 9.5e-18 94.0 91 54.9
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.1e-17 92.8 64 70.3
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.8e-17 92.4 145 41.4
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 3.6e-17 92.0 54 77.8
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 8.0e-17 90.9 67 70.1
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-16 89.7 48 81.2
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-16 89.4 182 34.1
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 8.9e-16 87.4 58 69.0
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 4.4e-15 85.1 167 36.5
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 9.8e-15 84.0 47 80.9
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 6.3e-14 81.3 47 76.6
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.8e-13 79.7 173 34.7
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 5.4e-13 78.2 60 66.7
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.6e-10 68.2 174 31.6
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 6.1e-09 64.7 100 39.0
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.1e-08 62.4 96 45.8
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.0e-08 62.0 85 55.3
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-08 61.2 48 58.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.2e-07 60.5 50 66.0
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.2e-07 60.5 50 66.0
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.0e-07 59.7 87 52.9
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.7e-06 55.5 50 56.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 4.9e-06 55.1 32 87.5
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 4.9e-06 55.1 45 48.9


User provided reference genes

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