Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 6.5e-99 364.0 176 100.0
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 2.4e-69 265.8 162 80.2
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 4.1e-61 238.4 149 75.2
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 6.6e-59 231.1 149 72.5
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 6.8e-56 221.1 149 69.8
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 2.6e-55 219.2 149 69.1
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 1.7e-54 216.5 149 69.8
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 2.2e-54 216.1 149 69.8
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 3.7e-54 215.3 151 70.2
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 8.3e-54 214.2 149 69.8
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 8.3e-54 214.2 149 68.5
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 8.3e-54 214.2 150 70.0
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 8.3e-54 214.2 149 69.1
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 4.1e-53 211.8 150 68.0
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 5.4e-53 211.5 154 66.9
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 9.2e-53 210.7 149 63.1
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 2.0e-52 209.5 149 66.4
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 3.5e-52 208.8 160 63.1
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 4.6e-52 208.4 150 66.7
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 4.6e-52 208.4 149 66.4
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 5.9e-52 208.0 149 67.8
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 5.9e-52 208.0 149 66.4
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 7.8e-52 207.6 160 65.0
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 3.0e-51 205.7 149 64.4
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 6.6e-51 204.5 150 65.3
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 8.6e-51 204.1 149 66.4
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.1e-50 203.8 149 65.1
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 2.5e-50 202.6 149 64.4
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 3.3e-50 202.2 149 65.1
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.3e-50 201.8 148 66.2
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 5.6e-50 201.4 151 63.6
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 9.5e-50 200.7 150 65.3
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 1.2e-49 200.3 163 60.7
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 2.1e-49 199.5 148 64.9
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.8e-49 199.1 149 65.8
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 2.8e-49 199.1 149 60.4
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 4.7e-49 198.4 149 63.8
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 8.0e-49 197.6 149 62.4
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 1.4e-48 196.8 149 60.4
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.4e-48 196.8 149 64.4
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 4.0e-48 195.3 161 61.5
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 8.9e-48 194.1 163 60.7
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 8.9e-48 194.1 148 62.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 1.2e-47 193.7 160 60.0
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 1.2e-47 193.7 150 62.7
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 1.2e-47 193.7 150 62.7
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 3.4e-47 192.2 161 58.4
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 5.8e-47 191.4 161 59.6
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 7.5e-47 191.0 162 59.9
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 7.5e-47 191.0 150 62.0
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 9.8e-47 190.7 148 62.8
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.7e-46 189.9 152 62.5
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.7e-46 189.9 149 63.1
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 1.7e-46 189.9 148 62.8
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 1.7e-46 189.9 162 56.2
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 2.2e-46 189.5 148 63.5
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 2.2e-46 189.5 148 63.5
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 2.9e-46 189.1 150 61.3
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 2.9e-46 189.1 162 59.3
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.7e-46 188.7 151 61.6
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 3.7e-46 188.7 149 59.1
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 8.3e-46 187.6 149 59.7
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 1.4e-45 186.8 149 57.0
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 2.4e-45 186.0 149 59.1
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 4.1e-45 185.3 149 62.4
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 7.0e-45 184.5 148 58.1
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 1.2e-44 183.7 160 57.5
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 3.5e-44 182.2 161 57.1
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 4.6e-44 181.8 151 58.9
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 7.8e-44 181.0 158 57.0
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 7.8e-44 181.0 149 61.1
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 7.8e-44 181.0 159 56.0
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 7.8e-44 181.0 162 58.0
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 1.0e-43 180.6 165 57.6
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.0e-43 180.6 150 60.0
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 1.0e-43 180.6 165 57.6
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 1.3e-43 180.3 146 60.3
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.0e-43 179.1 159 55.3
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 3.9e-43 178.7 149 56.4
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 8.6e-43 177.6 165 56.4
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 1.1e-42 177.2 162 58.0
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 1.5e-42 176.8 162 57.4
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 2.5e-42 176.0 165 56.4
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 2.5e-42 176.0 165 56.4
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 2.5e-42 176.0 149 57.0
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 4.7e-41 171.8 149 56.4
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 2.3e-40 169.5 149 55.0
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.5e-39 166.8 148 54.7
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 9.9e-39 164.1 149 56.4
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 1.7e-38 163.3 114 65.8
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 2.9e-38 162.5 154 56.5
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 1.1e-34 150.6 158 48.1
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 3.8e-30 135.6 157 46.5
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 2.5e-26 122.9 149 45.6
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 3.6e-25 119.0 90 62.2
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 1.1e-24 117.5 149 45.0
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 7.6e-23 111.3 79 67.1
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 1.1e-21 107.5 80 61.2
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.4e-21 107.1 83 63.9
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 1.2e-20 104.0 69 72.5
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 3.5e-20 102.4 81 61.7
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 5.1e-19 98.6 70 67.1
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 5.8e-15 85.1 150 39.3
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 2.1e-12 76.6 92 45.7
Cfa021425 Carpinus fangiana HOM05D006499 ORTHO05D007874 9.0e-08 61.2 102 35.3
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 2.0e-07 60.1 96 34.4
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 5.8e-07 58.5 146 24.7
Nn6g33750 Nelumbo nucifera HOM05D006499 ORTHO05D007874 3.8e-06 55.8 42 59.5
Pp3s30_680 Physcomitrium patens HOM05D006499 ORTHO05D007874 8.4e-06 54.7 136 27.2


User provided reference genes

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