Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 4.0e-78 294.7 146 100.0
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.7e-15 86.7 81 59.3
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.7e-15 86.7 60 70.0
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 2.2e-15 86.3 84 57.1
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.2e-15 86.3 61 70.5
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 3.7e-15 85.5 56 76.8
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.8e-15 85.1 76 61.8
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 6.3e-15 84.7 58 72.4
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 6.3e-15 84.7 73 58.9
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.1e-14 84.0 76 60.5
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.1e-14 84.0 75 61.3
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.1e-14 84.0 74 59.5
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.1e-14 84.0 55 78.2
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.4e-14 83.6 74 60.8
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 1.8e-14 83.2 58 70.7
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 2.4e-14 82.8 79 59.5
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 3.1e-14 82.4 59 69.5
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 3.1e-14 82.4 59 69.5
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 3.1e-14 82.4 78 59.0
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 5.3e-14 81.6 74 60.8
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 5.3e-14 81.6 74 60.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 5.3e-14 81.6 81 58.0
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 5.3e-14 81.6 59 71.2
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 7.0e-14 81.3 80 56.2
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 7.0e-14 81.3 58 70.7
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 7.0e-14 81.3 55 74.5
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 9.1e-14 80.9 58 70.7
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.2e-13 80.5 74 60.8
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.2e-13 80.5 83 54.2
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.2e-13 80.5 84 53.6
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.6e-13 80.1 78 57.7
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.6e-13 80.1 80 55.0
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.6e-13 80.1 75 58.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.6e-13 80.1 76 56.6
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 2.0e-13 79.7 76 55.3
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 2.0e-13 79.7 81 56.8
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 2.6e-13 79.3 84 54.8
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.5e-13 79.0 63 63.5
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.5e-13 79.0 75 57.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.5e-13 79.0 83 54.2
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 4.5e-13 78.6 80 55.0
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 5.9e-13 78.2 81 55.6
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 5.9e-13 78.2 75 57.3
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 7.7e-13 77.8 83 50.6
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 7.7e-13 77.8 80 52.5
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 7.7e-13 77.8 84 54.8
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.0e-12 77.4 82 51.2
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.0e-12 77.4 84 50.0
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.0e-12 77.4 82 51.2
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.0e-12 77.4 84 50.0
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.0e-12 77.4 82 51.2
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.0e-12 77.4 65 60.0
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.3e-12 77.0 57 63.2
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.3e-12 77.0 85 49.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.3e-12 77.0 75 58.7
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 1.3e-12 77.0 75 54.7
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 1.3e-12 77.0 60 66.7
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.3e-12 77.0 75 57.3
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.3e-12 77.0 75 57.3
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.3e-12 77.0 84 51.2
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.7e-12 76.6 85 49.4
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.7e-12 76.6 74 56.8
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.2e-12 76.3 74 55.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 2.9e-12 75.9 63 60.3
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.8e-12 75.5 56 66.1
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.8e-12 75.5 58 63.8
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 5.0e-12 75.1 84 48.8
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 5.0e-12 75.1 85 50.6
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 6.5e-12 74.7 55 63.6
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 6.5e-12 74.7 55 63.6
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.5e-11 73.6 66 57.6
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.5e-11 73.6 57 63.2
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.9e-11 73.2 73 56.2
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.9e-11 73.2 88 52.3
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 2.5e-11 72.8 74 55.4
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 2.5e-11 72.8 74 55.4
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.2e-11 72.0 73 53.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 5.5e-11 71.6 83 50.6
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 5.5e-11 71.6 79 51.9
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 5.5e-11 71.6 91 51.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 7.2e-11 71.2 61 59.0
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.2e-10 70.5 60 60.0
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 1.2e-10 70.5 54 64.8
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.6e-10 70.1 58 58.6
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.1e-10 69.7 85 52.9
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 2.1e-10 69.7 74 54.1
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 2.7e-10 69.3 56 62.5
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-10 68.9 57 54.4
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.7e-10 68.6 73 50.7
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 6.1e-10 68.2 79 49.4
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 6.1e-10 68.2 56 67.9
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 1.0e-09 67.4 77 49.4
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.4e-09 67.0 69 55.1
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 3.0e-09 65.9 83 45.8
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 4.0e-09 65.5 81 45.7
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 5.2e-09 65.1 83 45.8
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.6e-08 62.8 81 46.9
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.4e-08 62.0 78 43.6
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 5.7e-08 61.6 69 52.2
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.7e-08 61.6 81 46.9
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.7e-08 61.6 69 52.2
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 5.7e-08 61.6 61 57.4
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 5.7e-08 61.6 55 56.4
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.5e-08 61.2 51 60.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 7.5e-08 61.2 56 53.6
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.3e-07 60.5 85 43.5
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 3.7e-07 58.9 81 43.2
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 4.8e-07 58.5 59 50.8
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.1e-06 57.4 59 50.8
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.8e-06 56.6 59 50.8
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 4.1e-06 55.5 82 40.2


User provided reference genes

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