Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.6e-196 689.1 326 100.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 3.4e-162 575.1 319 81.5
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.3e-161 573.2 318 83.0
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.1e-160 570.1 323 79.9
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.4e-160 569.7 323 79.6
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.4e-160 569.7 323 79.6
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.9e-160 569.3 323 78.0
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 5.5e-160 567.8 323 79.6
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 5.5e-160 567.8 320 79.4
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 9.3e-160 567.0 323 78.9
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.6e-159 565.1 323 78.9
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 3.6e-159 565.1 319 78.4
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 6.1e-159 564.3 319 80.6
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 3.0e-158 562.0 321 80.1
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 5.7e-157 557.8 320 78.4
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 2.8e-156 555.4 318 78.9
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.8e-155 552.7 318 78.6
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.4e-155 552.4 323 77.1
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 4.1e-155 551.6 323 76.5
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 6.9e-155 550.8 317 78.5
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 9.1e-155 550.4 319 76.5
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 1.5e-154 549.7 320 77.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 3.4e-154 548.5 323 76.2
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.4e-154 548.5 319 77.1
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 4.5e-154 548.1 315 78.1
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 7.7e-154 547.4 318 78.3
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.3e-153 546.6 318 77.7
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 2.2e-153 545.8 318 77.4
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.2e-153 545.8 320 77.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.8e-153 545.0 329 75.4
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.9e-152 542.7 321 74.5
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.2e-152 540.8 319 76.5
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.2e-151 540.0 321 74.1
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 2.7e-151 538.9 319 75.9
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 2.7e-151 538.9 320 73.8
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.0e-150 537.0 320 75.0
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.4e-150 536.6 319 75.9
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.3e-150 535.8 319 75.2
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 3.0e-150 535.4 321 74.1
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 3.9e-150 535.0 318 78.0
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.1e-150 534.6 320 75.9
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.1e-150 534.6 315 75.9
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 5.1e-150 534.6 319 76.5
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 8.8e-150 533.9 321 73.8
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 1.1e-149 533.5 325 74.2
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.0e-149 532.7 315 74.9
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 2.6e-149 532.3 319 75.9
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.6e-149 532.3 322 75.2
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 7.4e-149 530.8 319 74.6
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.3e-148 530.0 315 74.3
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.3e-148 530.0 320 75.3
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.7e-148 529.6 319 74.6
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 2.2e-148 529.3 319 74.6
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.2e-148 529.3 320 74.4
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 2.2e-148 529.3 321 75.7
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.2e-148 529.3 323 72.8
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.8e-148 528.1 317 76.0
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 4.8e-148 528.1 318 74.5
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 6.3e-148 527.7 319 75.5
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 6.3e-148 527.7 317 76.3
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 8.2e-148 527.3 319 74.9
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 1.1e-147 526.9 318 74.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.1e-147 525.4 311 74.9
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 5.3e-147 524.6 317 75.4
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.9e-147 524.2 318 74.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 9.1e-147 523.9 318 74.2
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 9.1e-147 523.9 318 73.9
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.5e-146 523.1 321 72.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.0e-146 522.7 321 75.1
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 2.6e-146 522.3 322 73.3
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 3.4e-146 521.9 319 74.9
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.4e-146 521.9 319 74.0
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 4.5e-146 521.5 318 73.6
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 5.0e-145 518.1 319 75.2
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 5.0e-145 518.1 316 73.4
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 5.0e-145 518.1 320 73.8
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 8.5e-145 517.3 319 75.2
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.1e-144 516.9 320 71.6
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.5e-144 515.8 318 73.6
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 3.2e-144 515.4 315 74.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 4.2e-144 515.0 319 73.4
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.6e-143 513.1 318 73.0
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.6e-143 511.9 322 71.1
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 6.1e-143 511.1 319 72.4
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 7.9e-143 510.8 319 72.1
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.3e-142 509.2 314 74.8
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 3.0e-142 508.8 319 74.3
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 8.8e-142 507.3 318 72.6
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.5e-141 506.5 320 70.9
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.4e-141 505.0 320 71.2
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.4e-141 504.2 318 70.4
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 7.4e-141 504.2 319 69.9
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 2.2e-140 502.7 318 70.8
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.2e-140 502.7 320 69.7
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.8e-140 502.3 318 70.4
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.1e-139 498.8 320 70.6
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.3e-139 498.0 308 72.1
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.1e-139 497.3 308 72.4
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 9.1e-139 497.3 315 70.8
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.6e-138 496.5 318 70.8
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 4.5e-138 495.0 318 67.3
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.2e-137 492.7 288 77.4
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.0e-137 491.5 318 70.8
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-136 490.0 288 77.1
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.5e-136 490.0 318 67.9
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.2e-136 488.8 319 69.0
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.2e-136 487.6 318 69.2
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.2e-135 486.9 315 68.6
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 4.7e-135 485.0 315 68.9
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 4.7e-135 485.0 309 68.6
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 4.0e-134 481.9 304 70.4
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 4.0e-134 481.9 306 67.3
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.2e-134 481.5 309 68.6
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 8.8e-134 480.7 315 68.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.5e-133 479.9 319 70.2
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.0e-133 479.6 297 72.1
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 4.4e-133 478.4 315 67.9
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 5.7e-133 478.0 304 69.7
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 7.5e-133 477.6 315 66.7
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 7.5e-133 477.6 302 68.2
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.3e-132 476.9 304 69.7
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 2.2e-132 476.1 304 69.4
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 7.0e-131 471.1 319 67.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 5.9e-130 468.0 274 75.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.6e-125 452.6 316 64.2
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 2.8e-124 449.1 304 66.4
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 7.0e-123 444.5 314 62.1
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 2.7e-122 442.6 289 68.5
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 3.5e-122 442.2 320 62.5
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 3.5e-122 442.2 318 62.6
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.5e-120 436.8 314 64.6
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.6e-119 433.3 294 68.7
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.2e-116 422.9 306 60.5
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.5e-112 409.5 308 58.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-109 399.8 322 59.6
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.0e-109 399.8 322 59.6
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 7.0e-107 391.3 216 81.5
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.0e-106 389.8 303 63.0
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 2.0e-106 389.8 306 57.5
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.2e-100 369.8 228 71.1
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 4.3e-96 355.5 307 54.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 2.1e-90 336.7 309 50.8
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.2e-85 320.9 274 58.4
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 2.0e-77 293.5 182 73.1
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.6e-74 283.9 308 47.7
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.8e-68 262.7 263 49.8
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.5e-53 214.2 134 74.6
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.5e-52 208.8 126 70.6
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-44 184.1 117 70.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.1e-43 181.4 322 34.2
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 2.8e-39 166.8 310 32.6
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.1e-30 136.7 99 57.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.2e-29 134.8 245 34.3
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 5.9e-29 132.5 348 28.2
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.5e-16 89.0 59 71.2
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 2.2e-12 77.4 74 52.7


User provided reference genes

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