Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0324 Trochodendron aralioides HOM05D000611 ORTHO05D004334 3.6e-76 288.1 141 100.0
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 3.0e-22 109.0 71 81.7
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 1.8e-19 99.8 67 76.1
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 1.9e-16 89.7 57 77.2
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 9.4e-16 87.4 57 73.7
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 1.2e-15 87.0 58 75.9
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 3.6e-15 85.5 57 73.7
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 3.6e-15 85.5 57 73.7
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 4.7e-15 85.1 57 73.7
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 6.1e-15 84.7 57 71.9
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.8e-14 83.2 59 69.5
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 1.8e-14 83.2 57 70.2
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 1.8e-14 83.2 73 56.2
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 1.8e-14 83.2 73 56.2
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 2.3e-14 82.8 53 71.7
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 5.2e-14 81.6 73 58.9
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 6.7e-14 81.3 57 66.7
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 6.7e-14 81.3 57 68.4
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 8.8e-14 80.9 57 68.4
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 8.8e-14 80.9 57 66.7
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 8.8e-14 80.9 57 66.7
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 1.5e-13 80.1 59 64.4
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 2.0e-13 79.7 73 57.5
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 2.0e-13 79.7 56 67.9
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 2.0e-13 79.7 56 67.9
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 2.0e-13 79.7 68 61.8
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 3.3e-13 79.0 52 73.1
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 5.7e-13 78.2 53 71.7
Gohir.D06G041233 Gossypium hirsutum HOM05D000611 ORTHO05D004334 9.7e-13 77.4 55 65.5
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.3e-12 77.0 52 69.2
CSS0013647 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 1.7e-12 76.6 71 57.7
Nn4g24174 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.7e-12 76.6 57 66.7
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 2.8e-12 75.9 73 52.1
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 3.7e-12 75.5 57 59.6
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 3.7e-12 75.5 57 59.6
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 4.8e-12 75.1 57 61.4
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 6.3e-12 74.7 56 60.7
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 8.2e-12 74.3 55 67.3
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 8.2e-12 74.3 57 64.9
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 8.2e-12 74.3 57 63.2
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.8e-11 73.2 57 63.2
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 1.8e-11 73.2 59 62.7
Aqoxy3G00114 Aquilegia oxysepala HOM05D000611 ORTHO05D004334 2.4e-11 72.8 57 61.4
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 3.1e-11 72.4 57 59.6
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 3.1e-11 72.4 53 60.4
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 3.1e-11 72.4 56 62.5
Rhsim03G0037200 Rhododendron simsii HOM05D000611 ORTHO05D004334 3.1e-11 72.4 56 58.9
Glyma.11G217600 Glycine max HOM05D000611 ORTHO05D004334 4.1e-11 72.0 56 60.7
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 4.1e-11 72.0 59 55.9
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 5.3e-11 71.6 59 57.6
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 7.0e-11 71.2 56 58.9
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 7.0e-11 71.2 56 58.9
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 7.0e-11 71.2 57 57.9
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 9.1e-11 70.9 59 59.3
AUR62023231 Chenopodium quinoa HOM05D000611 ORTHO05D004334 9.1e-11 70.9 59 59.3
LjContig00141g0016319 Lotus japonicus HOM05D000611 ORTHO05D004334 1.2e-10 70.5 52 63.5
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 2.0e-10 69.7 56 60.7
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.0e-10 69.7 59 54.2
Actinidia36368 Actinidia chinensis HOM05D000611 ORTHO05D004334 2.6e-10 69.3 70 52.9
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 2.6e-10 69.3 56 60.7
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 3.5e-10 68.9 57 57.9
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 4.5e-10 68.6 53 66.0
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 7.7e-10 67.8 55 56.4
Lj2g0007530 Lotus japonicus HOM05D000611 ORTHO05D004334 7.7e-10 67.8 117 37.6
HPP92_009716 Vanilla planifolia HOM05D000611 ORTHO05D004334 7.7e-10 67.8 74 47.3
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 1.0e-09 67.4 56 57.1
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 1.3e-09 67.0 56 57.1
CSS0037318 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.2e-09 66.2 94 41.5
Lj2g0020896 Lotus japonicus HOM05D000611 ORTHO05D004334 2.2e-09 66.2 104 37.5
Gohir.D09G052906 Gossypium hirsutum HOM05D000611 ORTHO05D004334 2.9e-09 65.9 59 52.5
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 2.9e-09 65.9 57 61.4
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 2.9e-09 65.9 57 61.4
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 2.9e-09 65.9 58 53.4
Rhsim08G0147400 Rhododendron simsii HOM05D000611 ORTHO05D004334 3.8e-09 65.5 56 55.4
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 5.0e-09 65.1 56 55.4
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 5.0e-09 65.1 53 60.4
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 5.0e-09 65.1 57 54.4
Dinv26577 Davidia involucrata HOM05D000611 ORTHO05D004334 8.5e-09 64.3 57 59.6
vmacro22900 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 8.5e-09 64.3 57 54.4
MBI10_g08554_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 1.1e-08 63.9 53 62.3
PSO170G1854 Papaver somniferum HOM05D000611 ORTHO05D004334 1.1e-08 63.9 72 51.4
QL06p023072 Quercus lobata HOM05D000611 ORTHO05D004334 1.1e-08 63.9 52 61.5
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.1e-08 63.9 57 54.4
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 1.9e-08 63.2 118 35.6
Hund16210 Selenicereus undatus HOM05D000611 ORTHO05D004334 1.9e-08 63.2 59 57.6
vmacro17597 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.5e-08 62.8 63 49.2
EL10Ac1g01296 Beta vulgaris HOM05D000611 ORTHO05D004334 3.2e-08 62.4 72 44.4
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 4.2e-08 62.0 57 50.9
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 4.2e-08 62.0 57 52.6
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 4.2e-08 62.0 58 58.6
Gohir.A09G052128 Gossypium hirsutum HOM05D000611 ORTHO05D004334 4.2e-08 62.0 55 52.7
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 4.2e-08 62.0 57 50.9
ATR0598G054 Amborella trichopoda HOM05D000611 ORTHO05D004334 5.5e-08 61.6 58 55.2
ClCG05G011010 Citrullus lanatus HOM05D000611 ORTHO05D004334 5.5e-08 61.6 52 53.8
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 5.5e-08 61.6 58 50.0
AUR62012480 Chenopodium quinoa HOM05D000611 ORTHO05D004334 7.2e-08 61.2 57 49.1
Gorai.006G056800 Gossypium raimondii HOM05D000611 ORTHO05D004334 9.4e-08 60.8 57 49.1
ECA238G1988 Erigeron canadensis HOM05D000611 ORTHO05D004334 1.2e-07 60.5 83 42.2
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 1.2e-07 60.5 58 50.0
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 1.2e-07 60.5 123 33.3
DCAR_025872 Daucus carota HOM05D000611 ORTHO05D004334 1.6e-07 60.1 58 55.2
Os08g0384100 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D004334 1.6e-07 60.1 58 48.3
CDE04G0197 Ceratophyllum demersum HOM05D000543 ORTHO05D004334 2.1e-07 59.7 57 50.9
CDE06G1088 Ceratophyllum demersum HOM05D000611 ORTHO05D004334 2.1e-07 59.7 57 50.9
Cc04_g06500 Coffea canephora HOM05D000611 ORTHO05D004334 2.1e-07 59.7 59 54.2
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 2.1e-07 59.7 52 51.9
CsaV3_3G021570 Cucumis sativus L. HOM05D000611 ORTHO05D004334 2.7e-07 59.3 52 51.9
Lalb_Chr02g0154471 Lupinus albus HOM05D000611 ORTHO05D004334 2.7e-07 59.3 58 50.0
Ciclev10010802m.g Citrus clementina HOM05D000611 ORTHO05D004334 3.6e-07 58.9 56 51.8
Haze_12064 Corylus avellana HOM05D000611 ORTHO05D004334 4.7e-07 58.5 59 57.6
Lsat_1_v5_gn_2_79980 Lactuca sativa HOM05D000379 ORTHO05D004334 6.1e-07 58.2 70 48.6
Lalb_Chr18g0053361 Lupinus albus HOM05D000611 ORTHO05D004334 6.1e-07 58.2 56 50.0
DCAR_003177 Daucus carota HOM05D000611 ORTHO05D004334 8.0e-07 57.8 56 51.8
HanXRQChr09g0262221 Helianthus annuus HOM05D000611 ORTHO05D004334 1.4e-06 57.0 52 53.8
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 2.3e-06 56.2 57 47.4
arahy.Tifrunner.gnm1.ann1.FBT475 Arachis hypogaea HOM05D000611 ORTHO05D004334 2.3e-06 56.2 72 40.3
Ca_05862_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 2.3e-06 56.2 56 46.4
DCAR_002572 Daucus carota HOM05D000611 ORTHO05D004334 2.3e-06 56.2 68 45.6
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 2.3e-06 56.2 57 47.4
TPR.G3467 Trifolium pratense HOM05D000611 ORTHO05D004334 6.7e-06 54.7 87 32.2


User provided reference genes

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