Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0299 Trochodendron aralioides HOM05D008944 ORTHO05D012715 0.0e+00 4892.0 2864 100.0
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 0.0e+00 1681.8 2327 52.7
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 8.5e-164 583.6 2811 29.4
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 2.2e-159 568.9 3231 29.0
TAR374G0977 Trochodendron aralioides HOM05D008944 ORTHO05D012715 4.7e-130 471.5 574 54.0
Nn3g16742 Nelumbo nucifera HOM05D008944 ORTHO05D012715 2.3e-124 452.6 2904 27.3
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 2.4e-49 203.4 2464 25.0
GSVIVG01032410001 Vitis vinifera HOM05D008944 ORTHO05D012715 1.4e-46 194.1 1718 26.6
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 2.4e-41 176.8 2919 23.8
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 3.2e-38 166.4 2905 23.9
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 7.2e-38 165.2 3140 22.2
Actinidia36114 Actinidia chinensis HOM05D008944 ORTHO05D012715 3.6e-37 162.9 1799 26.4
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 6.3e-34 152.1 3078 24.9
Actinidia05996 Actinidia chinensis HOM05D008944 ORTHO05D012715 1.3e-31 144.4 2501 23.9
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 2.3e-28 133.7 2828 23.7
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 2.4e-25 123.6 1148 25.1
MBI10_g00741_MAGBIO Magnolia biondii HOM05D012441 ORTHO05D013726 1.4e-20 107.8 3130 23.3
Aqoxy5G03794 Aquilegia oxysepala HOM05D012441 ORTHO05D013726 1.3e-18 101.3 2522 23.7
PSO782G2207 Papaver somniferum HOM05D034920 ORTHO05D037276 2.2e-10 73.9 2497 23.6
Dinv31133 Davidia involucrata HOM05D008341 ORTHO05D009679 1.2e-08 68.2 114 41.2
vmacro05865 Vaccinium macrocarpon HOM05D008944 ORTHO05D017205 2.3e-07 63.9 1039 23.6
vmacro18280 Vaccinium macrocarpon HOM05D008944 ORTHO05D012715 8.6e-07 62.0 1942 23.1
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 1.1e-06 61.6 2935 23.3


User provided reference genes

Program Settings