Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 0.0e+00 1249.6 632 100.0
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 5.1e-178 628.6 566 58.5
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 3.6e-176 622.5 566 57.6
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 9.3e-172 607.8 635 50.7
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 1.9e-161 573.5 615 51.7
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 9.6e-161 571.2 638 49.7
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 2.4e-159 566.6 604 52.3
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 9.0e-159 564.7 626 50.5
RcHm_v2.0_Chr2g0168671 Rosa chinensis HOM05D007472 ORTHO05D009477 9.0e-159 564.7 647 50.2
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 5.8e-158 562.0 626 50.5
FAN09G3065 Fragaria x ananassa HOM05D007472 ORTHO05D009477 5.5e-156 555.4 622 50.2
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 1.0e-154 551.2 628 50.2
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 3.9e-154 549.3 598 51.0
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 1.5e-153 547.4 621 49.3
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 1.5e-153 547.4 598 50.8
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 1.9e-153 547.0 598 50.8
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 5.6e-153 545.4 634 48.4
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 6.2e-152 542.0 645 47.0
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 2.4e-151 540.0 622 48.7
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 1.0e-149 534.6 629 49.0
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 8.2e-136 488.4 623 46.7
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 9.1e-135 485.0 488 52.5
Duzib147G0661 Durio zibethinus HOM05D007472 ORTHO05D009477 4.5e-134 482.6 508 53.7
Atru.chr8.142 Acer truncatum HOM05D007472 ORTHO05D009477 6.1e-131 472.2 471 53.9
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 9.7e-129 464.9 584 45.9
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 3.7e-128 463.0 595 48.7
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 1.4e-127 461.1 581 46.1
GSVIVG01011394001 Vitis vinifera HOM05D007472 ORTHO05D009477 2.6e-126 456.8 394 60.4
CANSAT64G0327 Cannabis sativa HOM05D007472 ORTHO05D009477 1.4e-124 451.1 461 52.9
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 6.3e-120 435.6 619 41.2
ATR0037G017 Amborella trichopoda HOM05D007472 ORTHO05D009477 2.6e-118 430.3 589 41.9
FAN14G2920 Fragaria x ananassa HOM05D007472 ORTHO05D009477 7.2e-116 422.2 615 42.1
FvH4_6g49850 Fragaria vesca HOM05D007472 ORTHO05D009477 9.4e-116 421.8 570 45.1
FvH4_1g02370 Fragaria vesca HOM05D007472 ORTHO05D009477 8.2e-112 408.7 608 42.8
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 1.0e-109 401.7 578 43.9
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 5.5e-108 396.0 624 41.2
Zm00001eb029370 Zea mays HOM05D007472 ORTHO05D009477 3.4e-105 386.7 552 43.3
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 2.4e-103 380.6 539 42.9
CiPaw.03G027700 Carya illinoinensis HOM05D007472 ORTHO05D009477 4.2e-100 369.8 356 55.6
AUR62034398 Chenopodium quinoa HOM05D007472 ORTHO05D009477 1.5e-97 361.3 439 46.7
Aqoxy1G01781 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 4.4e-97 359.8 445 50.8
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 4.7e-91 339.7 439 45.1
BcaC03g17537 Brassica carinata HOM05D007472 ORTHO05D009477 2.3e-90 337.4 439 44.6
BolC2t11563H Brassica oleracea HOM05D007472 ORTHO05D009477 2.3e-90 337.4 439 44.6
C02p55120 Brassica napus HOM05D007472 ORTHO05D009477 3.0e-90 337.0 439 44.4
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 3.0e-90 337.0 454 43.6
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 2.4e-87 327.4 444 43.2
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 2.4e-87 327.4 463 43.0
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 7.3e-84 315.8 487 41.1
Cpa.g.sc1057.1 Carica papaya HOM05D007472 ORTHO05D009477 8.9e-82 308.9 260 59.2
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 9.2e-79 298.9 518 37.6
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 1.2e-78 298.5 462 40.3
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 6.0e-78 296.2 418 43.5
Thhalv10003677m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 4.7e-75 286.6 479 39.0
RcHm_v2.0_Chr2g0170061 Rosa chinensis HOM05D007472 ORTHO05D009477 1.1e-74 285.4 459 41.8
Thhalv10009510m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 6.8e-74 282.7 422 41.2
CDE04G1619 Ceratophyllum demersum HOM05D007472 ORTHO05D009477 5.1e-61 240.0 308 45.8
FAN14G0482 Fragaria x ananassa HOM05D007472 ORTHO05D009477 1.2e-59 235.3 422 41.0
CBR_g32589 Chara braunii HOM05D007472 ORTHO05D009477 2.1e-54 218.0 717 28.2
Os12g0587100 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 3.7e-43 180.6 278 39.9
BolC8t51634H Brassica oleracea HOM05D007472 ORTHO05D009477 1.4e-39 168.7 252 44.4
RcHm_v2.0_Chr6g0246231 Rosa chinensis HOM05D007472 ORTHO05D009477 1.8e-37 161.8 175 46.3
Hund13216 Selenicereus undatus HOM05D007472 ORTHO05D009477 1.8e-37 161.8 135 61.5
Pp3c11_18760 Physcomitrium patens HOM05D007472 ORTHO05D009477 8.7e-37 159.5 358 32.1
BcaC02g10318 Brassica carinata HOM05D001675 ORTHO05D001808 1.1e-36 159.1 266 40.6
SMO117G0184 Selaginella moellendorffii HOM05D007472 ORTHO05D009477 1.1e-36 159.1 638 27.7
FvH4_6g49030 Fragaria vesca HOM05D007472 ORTHO05D009477 1.3e-35 155.6 178 48.3
RcHm_v2.0_Chr6g0246241 Rosa chinensis HOM05D007472 ORTHO05D009477 2.1e-35 154.8 282 38.7
Mapoly0003s0158 Marchantia polymorpha HOM05D007472 ORTHO05D009477 1.1e-34 152.5 503 26.2
EL10Ac1g01538 Beta vulgaris HOM05D007472 ORTHO05D009477 4.0e-34 150.6 136 57.4
SEGI_35223 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 3.8e-32 144.1 555 24.5
Pp3c7_7390 Physcomitrium patens HOM05D007472 ORTHO05D009477 1.3e-29 135.6 410 28.0
Aqoxy1G01780 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 1.1e-26 125.9 185 43.8
CANSAT35G1746 Cannabis sativa HOM05D007472 ORTHO05D009477 5.5e-23 113.6 102 56.9
AT3G28880 Arabidopsis thaliana HOM05D007472 ORTHO05D009477 9.4e-23 112.8 174 42.5
EL10Ac2g03267 Beta vulgaris HOM05D007472 ORTHO05D009477 1.0e-21 109.4 81 63.0
BcaC07g41068 Brassica carinata HOM05D007472 ORTHO05D009477 2.3e-21 108.2 144 47.9
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 2.5e-20 104.8 332 29.5
Nn3g17438 Nelumbo nucifera HOM05D007472 ORTHO05D009477 4.3e-20 104.0 146 43.2
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-19 101.3 305 30.2
C08p40690 Brassica napus HOM05D007472 ORTHO05D009477 1.1e-18 99.4 167 39.5
AT3G28875 Arabidopsis thaliana HOM05D007472 ORTHO05D009477 1.8e-18 98.6 151 35.8
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-18 97.8 212 34.4
Mapoly0010s0140 Marchantia polymorpha HOM05D007472 ORTHO05D009477 1.2e-17 95.9 102 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3065 Anthoceros agrestis HOM05D007472 ORTHO05D009477 2.0e-17 95.1 110 45.5
Mapoly0010s0146 Marchantia polymorpha HOM05D007472 ORTHO05D009477 4.5e-17 94.0 102 47.1
Mapoly0213s0013 Marchantia polymorpha HOM05D007472 ORTHO05D009477 5.9e-17 93.6 102 51.0
Pp3c3_9890 Physcomitrium patens HOM05D007472 ORTHO05D009477 1.4e-15 89.0 145 37.9
Mapoly0161s0028 Marchantia polymorpha HOM05D007472 ORTHO05D009477 1.9e-15 88.6 117 43.6
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-14 85.1 217 30.9
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.1e-14 85.1 224 33.0
AUR62034397 Chenopodium quinoa HOM05D007472 ORTHO05D009477 3.6e-14 84.3 114 44.7
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 6.1e-14 83.6 259 30.9
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-13 82.8 153 36.6
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 3.9e-13 80.9 213 29.1
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 5.1e-13 80.5 197 34.0
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 5.7e-12 77.0 302 24.2
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-12 77.0 140 37.9
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-10 72.4 213 30.0
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-10 72.0 231 29.0
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-10 71.2 139 33.1
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 9.1e-10 69.7 175 31.4
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-09 68.6 204 29.4
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-09 68.6 226 32.3
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 2.0e-09 68.6 201 27.4
Hund13215 Selenicereus undatus HOM05D007472 ORTHO05D009477 2.6e-09 68.2 65 46.2
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 3.5e-09 67.8 173 31.8
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 1.0e-08 66.2 276 26.4
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-08 65.5 167 31.7
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-08 65.1 170 31.2
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 3.8e-08 64.3 149 30.2
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 5.0e-08 63.9 159 32.7
RcHm_v2.0_Chr2g0169051 Rosa chinensis HOM05D007472 ORTHO05D009477 8.5e-08 63.2 51 58.8
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.9e-07 62.0 264 24.2
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-07 60.5 157 28.0
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-07 60.5 185 27.0
BolC4t24572H Brassica oleracea HOM05D007472 ORTHO05D009477 7.2e-07 60.1 61 52.5
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.1e-06 58.5 218 28.4
C08p40680 Brassica napus HOM05D007472 ORTHO05D009477 2.7e-06 58.2 46 60.9
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.7e-06 58.2 152 30.3
Mapoly0035s0001 Marchantia polymorpha HOM05D011467 ORTHO05D014661 4.7e-06 57.4 145 31.0


User provided reference genes

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