Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.3e-275 950.7 470 100.0
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 7.7e-240 833.6 478 84.9
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.7e-231 805.8 468 82.7
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 2.5e-230 802.0 464 83.2
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 4.2e-230 801.2 466 82.6
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 3.0e-228 795.0 470 81.3
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 5.7e-227 790.8 470 80.9
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 4.1e-225 784.6 494 78.5
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.5e-224 781.6 469 80.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 5.9e-224 780.8 475 79.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 7.8e-224 780.4 465 80.6
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.9e-223 778.5 466 80.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 2.9e-223 778.5 461 80.3
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.8e-223 778.1 461 80.9
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 6.6e-223 777.3 508 75.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 1.5e-222 776.2 470 78.7
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 3.3e-222 775.0 467 79.0
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.6e-221 772.7 471 79.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 4.7e-221 771.2 469 79.3
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 4.7e-221 771.2 472 79.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.3e-220 768.8 465 77.8
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 5.2e-220 767.7 464 78.7
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 5.2e-220 767.7 470 78.1
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.9e-220 766.9 464 78.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.5e-219 766.1 465 79.1
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 2.0e-219 765.8 469 77.4
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 9.8e-219 763.5 465 77.8
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.3e-218 763.1 465 78.9
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.2e-218 762.3 465 77.8
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.9e-218 761.9 495 75.8
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.9e-218 761.9 470 76.4
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.4e-217 759.6 470 78.1
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 2.4e-217 758.8 469 76.5
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 9.2e-217 756.9 470 78.3
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 2.0e-216 755.7 468 77.4
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.0e-216 755.7 462 77.1
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 3.5e-216 755.0 463 78.2
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.0e-215 751.9 469 75.9
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.5e-214 749.6 499 72.5
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.5e-214 749.6 469 76.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.2e-213 746.5 470 76.0
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 6.2e-213 744.2 465 75.5
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.4e-212 743.0 466 75.3
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.0e-212 741.5 502 72.1
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.2e-211 740.0 499 72.1
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.5e-211 739.6 469 74.4
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.3e-210 736.5 503 71.4
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.2e-208 729.9 469 73.3
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 6.0e-208 727.6 556 66.9
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 4.3e-206 721.5 466 73.6
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.3e-202 709.9 461 74.0
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 4.9e-202 708.0 461 72.9
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.0e-199 700.3 468 73.9
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.4e-196 689.1 540 63.7
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 5.2e-196 688.0 466 71.5
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 4.2e-193 678.3 499 64.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 5.6e-190 667.9 462 68.2
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.2e-189 666.8 393 81.7
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.6e-189 666.4 462 67.7
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 2.8e-189 665.6 465 66.7
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 8.1e-189 664.1 402 76.9
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 5.2e-188 661.4 402 77.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 5.2e-188 661.4 402 77.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 7.6e-187 657.5 467 68.1
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.0e-183 645.6 382 80.9
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 5.1e-183 644.8 462 68.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 6.2e-181 637.9 406 73.6
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 5.3e-180 634.8 464 66.4
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.4e-179 632.1 465 66.0
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.2e-176 623.6 420 71.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 2.7e-176 622.5 468 67.3
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.7e-176 622.5 378 78.3
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 3.0e-175 619.0 466 64.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.2e-171 607.1 492 63.8
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 4.2e-169 598.6 365 79.2
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 4.0e-164 582.0 468 62.0
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.2e-163 580.5 327 85.0
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.6e-152 542.3 368 72.3
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.8e-149 532.7 389 71.0
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 2.4e-148 529.6 331 75.8
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 6.3e-117 425.2 278 72.3
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 4.4e-102 375.9 235 76.6
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.1e-73 281.6 175 78.9
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.1e-68 265.0 447 32.7
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.3e-64 251.5 154 80.5
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 9.6e-57 225.3 235 55.3
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.9e-52 211.1 159 69.2
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.5e-44 184.1 119 70.6
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 2.4e-31 141.0 432 25.9
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.0e-26 124.0 77 74.0
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.7e-21 108.2 396 25.3
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 1.1e-17 95.5 381 24.9
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 5.7e-17 93.2 407 25.1
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.6e-14 85.1 57 71.9
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.1e-07 62.4 58 51.7


User provided reference genes

Program Settings