Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 1.0e-85 320.1 168 100.0
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 7.2e-23 111.3 166 47.6
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 2.4e-18 96.3 177 42.9
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 2.6e-12 76.3 196 34.7
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.4e-12 75.9 167 36.5
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 9.8e-12 74.3 156 37.8
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.7e-11 73.6 151 37.1
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 4.9e-11 72.0 174 33.3
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 4.9e-11 72.0 202 34.2
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 6.4e-11 71.6 186 32.3
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 1.1e-10 70.9 197 35.5
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.4e-10 70.5 156 34.0
Aqoxy3G03168 Aquilegia oxysepala HOM05D007804 ORTHO05D009828 1.8e-10 70.1 178 34.8
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.8e-10 70.1 159 34.0
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 2.4e-10 69.7 167 32.9
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 4.1e-10 68.9 161 33.5
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 7.0e-10 68.2 177 32.2
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 9.2e-10 67.8 185 34.6
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 9.2e-10 67.8 185 34.6
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 9.2e-10 67.8 185 34.6
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 9.2e-10 67.8 174 32.8
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 1.6e-09 67.0 180 37.2
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 1.6e-09 67.0 180 37.2
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.6e-09 67.0 173 33.5
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 1.6e-09 67.0 172 30.8
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 2.0e-09 66.6 176 30.7
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 2.7e-09 66.2 156 34.6
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 2.7e-09 66.2 169 34.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.6e-09 65.5 162 30.9
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 5.9e-09 65.1 185 31.4
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.9e-09 65.1 161 31.1
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 5.9e-09 65.1 175 29.7
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 1.0e-08 64.3 169 32.0
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.0e-08 64.3 187 33.2
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 1.0e-08 64.3 150 35.3
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 1.0e-08 64.3 150 35.3
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 1.3e-08 63.9 182 33.5
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.7e-08 63.5 185 33.0
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 1.7e-08 63.5 185 33.0
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 1.7e-08 63.5 172 32.0
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 2.3e-08 63.2 166 34.3
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 2.3e-08 63.2 154 35.1
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.3e-08 63.2 163 29.4
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 3.0e-08 62.8 190 33.7
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 3.0e-08 62.8 172 32.0
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 3.9e-08 62.4 163 29.4
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.9e-08 62.4 163 29.4
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.9e-08 62.4 161 31.1
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 6.6e-08 61.6 174 32.2
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 6.6e-08 61.6 174 32.2
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 8.6e-08 61.2 164 29.3
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 1.1e-07 60.8 165 32.7
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.5e-07 60.5 166 28.3
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 1.9e-07 60.1 168 31.5
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 1.9e-07 60.1 170 32.4
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.5e-07 59.7 158 34.2
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 3.3e-07 59.3 220 30.5
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 5.6e-07 58.5 159 33.3
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 9.5e-07 57.8 167 30.5
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 1.2e-06 57.4 167 31.7
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 1.6e-06 57.0 161 32.9
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 1.6e-06 57.0 179 31.8
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 1.6e-06 57.0 154 31.2
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 2.1e-06 56.6 167 31.7
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.1e-06 56.6 164 33.5
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 3.6e-06 55.8 161 31.1
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 4.7e-06 55.5 171 30.4
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 6.2e-06 55.1 146 30.8
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 6.2e-06 55.1 158 33.5


User provided reference genes

Program Settings