Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 9.5e-175 617.5 512 100.0
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.3e-88 330.5 307 62.2
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.9e-58 231.1 310 47.7
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 2.5e-50 204.1 279 47.0
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 3.9e-43 180.3 272 44.9
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 2.5e-42 177.6 286 42.3
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.2e-37 160.6 301 39.9
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 3.2e-37 160.6 246 42.3
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 4.1e-37 160.2 322 35.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.2e-36 158.7 297 38.4
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 4.6e-36 156.8 294 39.1
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 6.6e-35 152.9 249 40.2
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 2.8e-33 147.5 302 38.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 5.2e-32 143.3 289 36.7
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.2e-32 143.3 262 38.2
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 5.2e-32 143.3 262 38.2
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 1.2e-31 142.1 260 36.2
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 2.6e-31 141.0 305 33.8
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 4.4e-31 140.2 287 38.0
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 7.6e-31 139.4 226 38.1
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 2.2e-30 137.9 199 42.2
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 6.4e-30 136.3 172 41.3
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 8.4e-30 136.0 301 34.9
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.4e-29 135.2 291 35.4
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.9e-29 134.8 151 48.3
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.9e-29 134.8 303 35.3
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 2.4e-29 134.4 290 33.8
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 2.1e-28 131.3 259 39.4
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 2.1e-28 131.3 166 44.6
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.7e-28 131.0 279 33.3
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 3.5e-28 130.6 180 41.1
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 6.0e-28 129.8 308 35.1
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 6.0e-28 129.8 185 41.6
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 7.8e-28 129.4 312 35.9
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 1.0e-27 129.0 295 34.2
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.7e-27 128.3 151 47.0
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 3.9e-27 127.1 255 38.0
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 8.7e-27 125.9 214 39.3
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.1e-26 125.6 204 40.2
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.1e-26 125.6 208 39.9
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 3.3e-26 124.0 208 39.4
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 4.3e-26 123.6 299 32.4
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 5.6e-26 123.2 295 33.9
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 1.2e-25 122.1 180 42.8
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.1e-25 121.3 276 34.1
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 1.4e-24 118.6 269 33.1
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 3.1e-24 117.5 277 33.2
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 4.0e-24 117.1 164 40.9
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.2e-23 115.5 180 41.7
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 6.4e-22 109.8 273 34.1
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 8.4e-22 109.4 192 36.5
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 1.4e-21 108.6 142 45.1
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 1.9e-21 108.2 160 41.9
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 2.4e-21 107.8 285 34.0
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 4.2e-21 107.1 239 33.9
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 4.2e-21 107.1 253 33.2
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 5.4e-21 106.7 273 33.3
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 5.4e-21 106.7 313 31.6
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 7.1e-21 106.3 178 36.5
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 6.0e-20 103.2 257 31.9
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 3.9e-19 100.5 266 31.2
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 8.7e-19 99.4 258 32.6
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 3.3e-18 97.4 129 44.2
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 4.3e-18 97.1 150 41.3
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 5.6e-18 96.7 159 35.2
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 4.8e-17 93.6 132 40.9
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 4.8e-17 93.6 153 37.3
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 8.1e-17 92.8 239 32.2
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 6.9e-16 89.7 314 28.0
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 6.9e-16 89.7 314 28.0
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 9.0e-16 89.4 204 35.3
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.6e-15 87.8 314 28.0
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 7.6e-15 86.3 272 29.4
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 3.2e-13 80.9 161 33.5
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 3.2e-13 80.9 161 33.5
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 7.1e-13 79.7 157 32.5
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 7.1e-13 79.7 157 32.5
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 9.3e-13 79.3 169 34.9
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-12 79.0 161 33.5
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.6e-12 78.6 185 33.5
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.0e-11 75.9 180 35.0
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 1.0e-11 75.9 139 31.7
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 2.3e-11 74.7 168 32.7
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 8.7e-11 72.8 102 42.2
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 1.1e-10 72.4 185 31.9
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.5e-10 72.0 163 33.1
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 7.4e-10 69.7 257 28.0
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 1.3e-09 68.9 217 29.0
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 4.8e-09 67.0 196 26.0
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 1.1e-08 65.9 175 29.1
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 3.1e-08 64.3 175 28.6
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 5.3e-08 63.5 175 28.6
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 5.3e-08 63.5 104 33.7
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 1.2e-07 62.4 175 28.0
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 2.6e-07 61.2 182 29.7
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 4.5e-07 60.5 188 27.7
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 4.5e-07 60.5 188 27.7
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 7.6e-07 59.7 102 40.2
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 1.3e-06 58.9 133 30.8
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 4.9e-06 57.0 132 31.1
Lj6E824T1 Lonicera japonica HOM05D007857 ORTHO05D009355 4.9e-06 57.0 137 29.9


User provided reference genes

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