Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 0.0e+00 1523.5 934 100.0
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.1e-236 823.2 891 63.2
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.4e-187 661.0 873 54.2
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.6e-183 647.5 747 59.4
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.4e-176 624.4 875 51.4
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 2.6e-162 577.0 713 51.1
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 4.0e-139 500.0 877 50.1
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 9.9e-138 495.4 882 44.8
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 2.4e-136 490.7 876 45.2
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.9e-133 481.1 874 44.1
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 5.6e-133 479.6 892 47.5
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.6e-132 478.0 870 46.3
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 2.6e-130 470.7 876 46.5
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 5.4e-128 463.0 865 43.0
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 4.6e-127 459.9 883 41.3
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 4.6e-127 459.9 875 44.1
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 3.0e-126 457.2 874 45.0
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 1.1e-125 455.3 883 42.0
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.5e-125 454.9 874 44.9
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 1.9e-125 454.5 747 43.9
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 7.6e-122 442.6 751 44.1
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 6.0e-119 433.0 717 42.3
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 5.1e-118 429.9 875 42.1
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 8.2e-116 422.5 751 44.2
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.4e-115 421.0 494 50.4
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 5.8e-114 416.4 713 43.6
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.6e-111 408.3 673 43.7
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.1e-111 407.9 856 42.5
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.0e-110 405.6 889 38.6
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 1.8e-110 404.8 708 42.5
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 5.1e-110 403.3 871 39.3
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 5.3e-107 393.3 897 39.7
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 6.9e-107 392.9 889 43.4
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 4.5e-106 390.2 871 40.4
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.9e-104 384.8 745 39.9
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 4.8e-100 370.2 907 40.8
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.1e-99 369.0 882 38.0
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 5.3e-99 366.7 845 38.5
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.6e-98 364.4 906 38.7
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 2.9e-97 360.9 860 36.7
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 5.0e-97 360.1 676 37.9
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 2.1e-95 354.8 884 37.9
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 3.0e-94 350.9 745 38.4
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 3.0e-94 350.9 773 38.0
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 5.1e-94 350.1 715 44.2
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 6.7e-94 349.7 713 40.4
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.4e-91 342.0 747 38.2
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.4e-91 342.0 745 36.9
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 1.8e-91 341.7 865 36.3
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 9.1e-91 339.3 883 40.0
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.0e-89 335.9 755 38.1
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.9e-88 331.6 736 37.1
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 3.6e-87 327.4 570 41.9
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 8.0e-87 326.2 750 38.1
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 3.9e-86 323.9 873 36.0
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 8.8e-86 322.8 904 35.5
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 2.2e-84 318.2 883 34.9
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.8e-83 315.1 733 40.8
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.8e-83 315.1 860 36.2
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 2.4e-83 314.7 755 39.2
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 7.0e-83 313.2 631 38.5
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 3.5e-82 310.8 753 37.3
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 3.4e-77 294.3 852 37.8
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 7.5e-77 293.1 675 37.5
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 1.1e-75 289.3 716 38.8
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 5.3e-75 287.0 896 36.9
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 5.0e-73 280.4 907 33.7
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 5.0e-73 280.4 705 35.2
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 3.2e-72 277.7 902 32.3
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 3.0e-70 271.2 620 36.1
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 2.0e-69 268.5 690 37.2
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.7e-68 265.4 743 33.0
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 1.8e-67 261.9 885 36.9
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 1.2e-66 259.2 662 43.2
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 2.0e-66 258.5 666 37.4
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.2e-61 242.7 757 33.6
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 1.0e-57 229.6 882 29.7
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 3.1e-54 218.0 886 37.0
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 4.0e-54 217.6 864 35.8
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.4e-51 209.1 350 40.0
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 1.8e-46 192.2 352 43.5
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 4.0e-46 191.0 462 35.5
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 1.5e-45 189.1 416 37.5
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.6e-37 161.8 868 29.8
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.6e-34 152.5 758 28.5
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 6.0e-34 150.6 755 28.5
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 6.0e-34 150.6 904 28.0
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.3e-33 148.7 750 28.9
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 5.1e-33 147.5 730 29.9
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 9.6e-32 143.3 898 29.5
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 3.4e-29 134.8 718 29.2
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 1.4e-27 129.4 901 28.6
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 1.9e-27 129.0 241 41.9
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 3.9e-25 121.3 532 28.8
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 7.3e-24 117.1 891 31.2
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.6e-23 115.9 919 28.5
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 2.8e-23 115.2 819 29.2
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 2.0e-21 109.0 214 36.9
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 6.4e-20 104.0 632 27.5
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 9.3e-19 100.1 532 29.5
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.2e-18 99.8 495 29.5
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 1.2e-18 99.8 495 29.5
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.6e-18 99.4 123 48.8
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 1.3e-17 96.3 755 29.5
TAR624G1358 Trochodendron aralioides HOM05D002002 ORTHO05D008797 3.1e-14 85.1 56 71.4
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 1.2e-13 83.2 111 49.5
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 3.4e-13 81.6 105 46.7
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 1.3e-12 79.7 498 29.1
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 3.8e-12 78.2 53 81.1
Sed0017129 Sechium edule HOM05D002002 ORTHO05D008797 8.4e-12 77.0 263 34.6
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.4e-11 76.3 359 27.6
TPR.G24664 Trifolium pratense HOM05D002002 ORTHO05D008797 9.3e-11 73.6 72 56.9
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 1.0e-09 70.1 187 31.0
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 2.1e-07 62.4 297 30.6


User provided reference genes

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