Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 0.0e+00 1386.7 791 100.0
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 5.9e-224 781.6 796 63.4
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 9.1e-209 731.1 797 62.9
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 2.8e-202 709.5 800 60.2
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 7.5e-195 684.9 684 65.5
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.7e-194 682.6 782 60.4
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.0e-191 674.5 856 54.9
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.7e-191 673.7 779 57.4
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.1e-190 671.0 749 59.5
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.6e-189 667.2 796 57.8
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 8.0e-189 664.8 803 56.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 2.6e-187 659.8 799 58.3
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.3e-186 657.5 798 57.1
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-186 657.5 798 57.3
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.9e-182 643.7 693 55.1
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 7.2e-182 641.7 764 57.9
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.8e-181 639.8 789 55.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.7e-181 639.0 766 56.8
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.8e-178 629.8 798 56.4
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.1e-177 627.9 793 56.0
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.5e-176 622.9 711 59.5
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.9e-174 617.1 832 51.7
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.1e-173 612.1 793 54.9
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 5.2e-172 609.0 866 43.6
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.5e-166 590.1 848 51.5
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.4e-164 584.3 748 56.0
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 5.8e-163 578.9 877 50.7
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 9.8e-163 578.2 722 55.5
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.3e-158 563.1 764 51.4
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 7.3e-158 562.0 639 60.1
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.2e-157 561.2 643 59.4
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.1e-156 558.1 801 50.7
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 8.9e-156 555.1 801 50.6
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 3.4e-155 553.1 795 52.2
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 8.3e-154 548.5 808 50.7
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.4e-153 547.7 668 47.5
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 4.1e-153 546.2 799 50.7
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 7.8e-152 542.0 704 46.6
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.1e-150 538.1 760 53.0
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.5e-150 537.7 809 51.1
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.3e-150 536.6 641 59.1
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.8e-148 530.8 805 50.7
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.4e-145 521.2 652 47.9
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.9e-145 520.8 781 51.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 7.1e-145 518.8 722 52.9
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 9.2e-145 518.5 800 51.0
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 9.2e-145 518.5 802 49.9
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.3e-143 514.6 695 45.5
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.4e-140 504.6 699 54.5
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.4e-140 503.8 755 50.7
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 3.5e-136 490.0 758 48.8
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 1.9e-134 484.2 721 52.1
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.3e-133 481.5 666 55.3
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 8.1e-133 478.8 798 48.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.1e-132 476.9 810 46.2
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 6.9e-132 475.7 665 53.7
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.2e-131 474.9 714 50.7
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.6e-128 464.5 801 46.8
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 7.9e-128 462.2 556 60.8
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 5.1e-127 459.5 480 51.5
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 8.7e-127 458.8 738 50.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.9e-126 457.6 720 49.7
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.4e-124 451.4 650 44.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 1.5e-123 448.0 719 49.5
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 9.3e-121 438.7 717 50.9
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.0e-119 435.3 780 47.1
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 5.7e-118 429.5 719 49.7
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-117 428.3 713 49.8
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 3.7e-117 426.8 786 46.2
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 1.1e-116 425.2 718 47.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.8e-116 424.5 765 46.7
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 7.6e-115 419.1 713 49.5
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 8.4e-114 415.6 660 49.7
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.1e-113 415.2 714 49.6
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 4.6e-112 409.8 785 45.1
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 6.7e-111 406.0 730 46.3
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.3e-110 403.7 739 47.8
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 5.7e-110 402.9 515 46.0
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 5.7e-110 402.9 733 47.5
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.4e-108 397.5 580 54.1
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-107 395.2 642 48.0
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.9e-106 390.6 655 49.2
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 3.0e-103 380.6 618 40.9
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.9e-98 364.0 553 51.5
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.7e-93 348.2 710 44.8
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 6.3e-93 346.3 597 48.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 8.0e-88 329.3 582 46.6
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.1e-80 304.7 462 58.7
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.5e-73 282.0 235 57.9
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 4.0e-71 273.9 450 52.4
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.2e-70 272.3 352 48.0
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 9.8e-70 269.2 725 35.0
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 7.0e-68 263.1 747 36.8
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.0e-58 232.6 271 49.1
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.7e-51 208.0 424 50.7
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 5.0e-50 203.8 676 29.3
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.4e-47 195.7 176 57.4
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 8.9e-47 193.0 523 30.8
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.0e-42 179.5 481 31.4
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.0e-39 167.5 226 48.7
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.1e-31 142.9 538 26.0
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.7e-29 135.6 192 45.3
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.4e-28 131.7 310 33.2
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.5e-25 121.7 194 43.3
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 9.0e-23 113.2 267 31.5
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 3.2e-20 104.8 292 31.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 5.4e-20 104.0 78 65.4
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 6.2e-16 90.5 76 57.9
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 2.6e-14 85.1 81 53.1
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 3.4e-14 84.7 134 45.5
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.5e-14 84.3 146 43.2
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-13 82.8 46 76.1
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 1.3e-13 82.8 118 47.5
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.9e-10 71.2 198 33.3
Haze_10728 Corylus avellana HOM05D063416 ORTHO05D034208 1.6e-08 65.9 106 44.3
Hund01947 Selenicereus undatus HOM05D001616 ORTHO05D004707 4.5e-06 57.8 172 27.3
C02p32190 Brassica napus HOM05D006757 ORTHO05D004651 7.6e-06 57.0 32 65.6


User provided reference genes

Program Settings