Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 0.0e+00 1621.3 854 100.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 0.0e+00 1185.2 863 74.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 0.0e+00 1119.8 771 76.4
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 0.0e+00 1117.8 859 71.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1094.0 861 68.2
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 0.0e+00 1092.8 860 68.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 0.0e+00 1078.2 921 64.7
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 2.1e-304 1048.9 859 66.8
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.2e-304 1047.3 776 71.9
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.8e-303 1045.8 865 66.7
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.5e-302 1042.7 863 66.0
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.4e-302 1041.6 866 67.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.9e-301 1038.5 856 67.1
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 6.4e-301 1037.3 860 65.7
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.1e-300 1036.6 858 66.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 4.6e-299 1031.2 864 66.4
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.1e-297 1026.5 856 65.4
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.5e-297 1026.2 839 66.4
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 3.6e-296 1021.5 852 65.0
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 3.6e-296 1021.5 856 64.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 7.6e-294 1013.8 862 64.7
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.2e-293 1012.3 856 64.5
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.8e-293 1011.5 872 63.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 3.8e-293 1011.5 844 66.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 8.7e-290 1000.3 866 64.2
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.6e-288 996.1 892 62.2
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.8e-287 992.6 865 64.0
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.1e-287 991.9 747 70.8
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 6.9e-287 990.7 816 66.3
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.4e-286 988.4 775 68.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.7e-285 986.1 848 64.6
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.9e-281 972.6 764 67.9
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.4e-279 965.7 852 62.4
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 5.3e-279 964.5 831 62.2
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.4e-276 955.7 856 64.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.2e-276 955.3 831 62.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 6.0e-275 951.0 805 64.5
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 5.1e-274 948.0 796 65.6
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 4.8e-272 941.4 806 66.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 1.4e-271 939.9 803 63.8
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 6.9e-271 937.6 860 60.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 9.3e-268 927.2 863 60.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.6e-267 926.4 864 61.6
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.0e-266 923.7 716 68.0
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.1e-265 920.2 810 62.8
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.9e-265 919.5 804 62.2
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 9.6e-265 917.1 833 61.5
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.2e-262 910.2 859 59.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.5e-262 909.8 852 58.9
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.0e-261 907.1 866 61.1
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.2e-260 902.1 862 57.7
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 3.6e-259 898.7 849 59.4
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.8e-256 889.0 735 66.1
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.1e-255 887.1 755 64.6
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 6.9e-255 884.4 858 58.5
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.2e-254 883.6 857 58.1
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.5e-254 881.7 856 60.4
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 4.5e-254 881.7 894 58.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.7e-253 879.8 855 58.6
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.5e-252 875.9 858 57.8
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 3.2e-252 875.5 775 62.1
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 4.6e-251 871.7 771 62.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 6.1e-251 871.3 865 57.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.4e-250 870.2 858 58.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.3e-250 869.4 807 59.9
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.7e-248 863.2 830 58.4
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.2e-248 862.8 863 57.6
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.8e-248 862.4 830 58.6
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 6.3e-248 861.3 859 57.4
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.1e-247 860.5 830 58.4
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.4e-247 860.1 752 62.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.4e-247 860.1 829 58.9
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 6.9e-247 857.8 847 57.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 6.9e-247 857.8 872 56.7
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.0e-246 856.3 852 57.4
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.6e-246 855.9 786 60.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.2e-245 852.8 798 59.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 3.8e-245 852.0 870 57.1
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 6.5e-245 851.3 810 59.5
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.1e-244 850.5 695 67.1
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.5e-244 848.2 911 53.5
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 3.0e-242 842.4 764 61.3
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 9.4e-228 794.3 801 54.9
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.5e-220 769.6 796 55.4
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.7e-213 746.9 779 52.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.4e-210 737.3 731 55.8
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 4.9e-208 728.8 564 70.2
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.7e-200 703.7 747 56.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.7e-200 703.7 866 51.5
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.7e-200 703.7 796 50.8
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.2e-200 703.4 493 73.8
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.1e-183 647.9 595 60.8
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.1e-183 647.9 591 60.7
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.1e-183 645.2 581 61.4
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 6.9e-178 628.6 588 59.0
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.0e-173 614.8 539 61.8
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 9.0e-170 601.7 632 55.1
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.2e-167 593.2 544 62.5
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 5.4e-167 592.4 542 62.5
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.6e-166 589.3 584 58.2
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.8e-139 499.6 872 40.9
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 5.5e-135 486.1 862 40.5
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.8e-125 454.5 790 36.7
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.7e-99 368.2 272 72.4
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.2e-86 325.5 288 62.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 2.8e-86 324.3 366 47.0
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.1e-85 320.9 284 64.4
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.8e-78 297.7 204 75.0
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.6e-78 297.4 626 32.4
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 3.7e-75 287.3 859 30.4
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.1e-74 285.8 278 56.8
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.6e-72 276.6 255 59.6
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 1.7e-56 225.3 844 25.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 7.4e-31 140.2 153 52.3
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.1e-23 116.3 146 49.3
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 6.5e-19 100.5 118 50.8
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.2e-17 96.3 104 51.9
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 9.1e-13 80.1 66 62.1
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.0e-11 76.6 117 43.6
MBI15_g33086_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D003895 2.2e-06 58.9 173 28.3
Cfa007363 Carpinus fangiana HOM05D001865 ORTHO05D001815 4.8e-06 57.8 225 25.3


User provided reference genes

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