Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 4.4e-189 664.5 333 100.0
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-128 463.8 313 76.7
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-128 463.8 313 76.7
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.5e-128 462.6 329 74.8
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 3.7e-127 458.8 328 74.4
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.5e-125 453.4 320 74.4
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 2.6e-125 452.6 327 71.6
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 3.4e-125 452.2 324 73.5
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 4.5e-125 451.8 315 76.2
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 5.8e-125 451.4 342 70.5
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 6.5e-124 448.0 324 72.8
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 6.5e-124 448.0 316 73.4
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 3.2e-123 445.7 323 73.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 4.2e-123 445.3 315 72.1
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 4.6e-122 441.8 326 70.9
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 3.0e-121 439.1 321 70.7
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.9e-121 438.7 315 72.7
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 6.7e-121 438.0 319 74.0
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.1e-120 437.2 317 72.9
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 1.5e-120 436.8 322 73.3
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 2.5e-120 436.0 298 75.2
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 5.7e-120 434.9 317 72.2
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 7.4e-120 434.5 318 69.5
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 7.4e-120 434.5 319 71.5
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 9.7e-120 434.1 322 70.8
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 2.2e-119 433.0 322 70.8
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 6.3e-119 431.4 322 70.5
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 1.1e-118 430.6 320 68.8
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 3.1e-118 429.1 313 70.9
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 5.3e-118 428.3 330 69.4
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 5.3e-118 428.3 322 67.4
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.2e-117 427.2 321 69.5
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.2e-117 427.2 322 70.2
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.5e-117 426.8 322 69.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.6e-117 426.0 319 69.3
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.6e-117 426.0 322 69.9
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.6e-117 426.0 322 68.3
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.6e-117 426.0 321 70.7
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 5.9e-117 424.9 325 67.7
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.7e-117 424.5 322 69.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 7.7e-117 424.5 312 71.5
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.0e-116 424.1 309 70.6
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.3e-116 423.7 322 69.3
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.3e-116 423.7 327 68.5
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.7e-116 423.3 314 70.4
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.7e-116 423.3 313 70.6
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.7e-116 423.3 366 63.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 1.7e-116 423.3 321 69.2
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.2e-116 422.9 315 68.9
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 2.9e-116 422.5 328 66.8
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 2.9e-116 422.5 322 68.3
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 5.0e-116 421.8 321 68.5
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 5.0e-116 421.8 315 68.6
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 8.5e-116 421.0 313 69.3
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 8.5e-116 421.0 308 72.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 4.2e-115 418.7 329 67.2
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 4.2e-115 418.7 308 69.2
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 4.2e-115 418.7 315 68.3
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 9.4e-115 417.5 315 70.5
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.2e-114 417.2 328 67.1
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 2.7e-114 416.0 310 70.3
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 2.7e-114 416.0 321 67.3
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.6e-114 415.2 361 63.4
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 5.7e-112 408.3 312 67.0
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.3e-111 404.8 319 68.0
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 1.1e-110 404.1 322 67.1
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 1.4e-110 403.7 315 66.7
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 2.4e-110 402.9 320 68.8
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 5.3e-110 401.7 316 63.9
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 6.9e-110 401.4 350 62.3
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 9.1e-110 401.0 317 66.9
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 9.1e-110 401.0 322 66.8
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 1.2e-109 400.6 320 68.4
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 1.5e-109 400.2 317 67.5
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.5e-109 400.2 319 67.1
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 2.6e-109 399.4 316 67.1
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.3e-108 397.1 350 62.0
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.7e-108 396.7 350 61.7
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 2.2e-108 396.4 314 65.0
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 5.0e-108 395.2 316 67.4
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 8.5e-108 394.4 326 66.6
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 1.1e-107 394.0 303 68.3
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 2.1e-106 389.8 366 59.0
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 4.7e-106 388.7 327 64.8
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.1e-104 384.0 319 64.9
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.5e-104 383.6 355 60.0
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 2.6e-104 382.9 322 64.6
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.7e-103 379.0 340 62.9
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.8e-102 376.7 315 62.2
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 8.5e-100 367.9 309 60.8
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 2.3e-97 359.8 348 59.2
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 2.3e-97 359.8 332 59.3
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.2e-97 358.6 352 59.9
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 9.7e-96 354.4 398 51.8
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.1e-91 340.9 312 60.3
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.9e-91 340.1 250 72.8
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.6e-90 335.9 319 60.5
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.7e-87 325.9 247 69.6
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 6.8e-81 305.1 275 60.7
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 3.4e-80 302.8 247 65.6
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.8e-79 299.7 286 57.7
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.2e-74 284.3 323 48.9
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 3.6e-74 282.7 230 65.7
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 6.1e-74 282.0 310 51.9
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 8.9e-73 278.1 185 74.6
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 4.4e-72 275.8 322 49.4
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 7.5e-72 275.0 203 70.4
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 3.2e-70 269.6 155 87.7
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.3e-67 259.6 148 87.2
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 9.5e-67 258.1 312 49.0
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 2.4e-62 243.4 215 62.8
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.0e-60 238.0 305 49.8
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 3.9e-60 236.1 198 65.2
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 8.9e-57 224.9 284 48.9
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 1.1e-54 218.0 222 56.3
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 5.1e-52 209.1 204 60.3
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 4.3e-51 206.1 122 82.0
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 4.6e-45 186.0 170 64.7
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 6.8e-41 172.2 180 53.3
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.3e-39 167.9 101 79.2
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 2.4e-38 163.7 335 35.5
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.5e-35 153.7 94 79.8
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 2.8e-34 150.2 106 76.4
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 4.9e-31 139.4 122 61.5
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 6.4e-31 139.0 85 80.0
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 7.9e-29 132.1 152 46.7
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 7.3e-27 125.6 308 31.5
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.0e-20 103.6 120 55.0
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 3.9e-20 103.2 130 43.8
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 8.1e-18 95.5 61 72.1
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 7.6e-16 89.0 54 83.3
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.3e-15 88.2 193 32.1
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-11 75.1 67 56.7
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.4e-09 68.2 90 45.6


User provided reference genes

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