Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 9.7e-104 380.2 196 100.0
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.9e-91 339.3 196 89.3
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.4e-73 280.0 195 77.4
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 4.0e-73 278.5 201 73.1
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 6.8e-73 277.7 203 75.9
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 1.1e-70 270.4 201 71.1
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 3.2e-70 268.9 187 76.5
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 7.0e-70 267.7 201 73.6
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 7.0e-70 267.7 199 71.9
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 9.2e-70 267.3 197 74.1
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 9.2e-70 267.3 207 71.5
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 1.6e-69 266.5 198 73.2
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 2.1e-69 266.2 200 74.5
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 4.6e-69 265.0 197 74.1
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 4.6e-69 265.0 197 74.1
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.0e-68 263.8 208 69.7
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 1.0e-68 263.8 161 82.6
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 1.7e-68 263.1 217 67.3
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.7e-68 263.1 199 74.4
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 1.7e-68 263.1 205 70.7
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 3.0e-68 262.3 200 73.5
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.9e-68 261.9 207 69.1
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 3.9e-68 261.9 193 72.0
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 5.0e-68 261.5 208 71.6
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.5e-67 260.0 164 80.5
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 1.5e-67 260.0 209 69.9
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 3.3e-67 258.8 177 76.8
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 4.3e-67 258.5 208 69.2
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.6e-67 258.1 164 79.9
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 5.6e-67 258.1 208 69.2
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.2e-66 256.9 158 81.6
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.1e-66 256.1 205 69.8
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 2.8e-66 255.8 185 74.6
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 2.8e-66 255.8 208 69.7
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 2.8e-66 255.8 167 77.8
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 3.6e-66 255.4 161 80.1
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 6.2e-66 254.6 201 70.1
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 6.2e-66 254.6 202 71.3
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 1.1e-65 253.8 207 70.5
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 2.3e-65 252.7 161 79.5
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 6.8e-65 251.1 197 68.5
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 8.9e-65 250.8 203 70.0
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 8.9e-65 250.8 196 71.4
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 1.2e-64 250.4 203 70.0
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.5e-64 250.0 202 67.3
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 2.0e-64 249.6 195 70.3
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 2.0e-64 249.6 197 67.5
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 9.9e-64 247.3 197 66.5
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.3e-63 246.9 172 75.0
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.7e-63 246.5 175 76.6
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 2.2e-63 246.1 196 68.9
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.2e-63 246.1 199 69.8
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 4.9e-63 245.0 202 65.3
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 6.4e-63 244.6 197 68.0
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 8.3e-63 244.2 198 67.7
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.1e-62 243.8 198 69.2
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 1.1e-62 243.8 170 77.1
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 1.1e-62 243.8 199 67.3
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 1.4e-62 243.4 174 73.0
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.4e-62 243.4 198 67.2
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 1.4e-62 243.4 199 67.8
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.9e-62 243.0 197 70.1
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.9e-62 243.0 182 69.2
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.9e-62 243.0 182 69.2
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.9e-62 243.0 199 68.3
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 5.4e-62 241.5 200 68.5
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 9.2e-62 240.7 195 67.7
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 9.2e-62 240.7 202 67.8
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 1.2e-61 240.4 158 79.1
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 2.7e-61 239.2 158 79.1
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 6.0e-61 238.0 200 70.0
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 2.3e-60 236.1 196 64.3
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 5.1e-60 235.0 199 64.8
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 6.6e-60 234.6 199 64.8
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 1.5e-59 233.4 198 63.1
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 1.5e-59 233.4 168 70.8
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 2.5e-59 232.6 130 87.7
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 3.3e-59 232.3 199 63.8
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 9.5e-59 230.7 166 71.1
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.2e-58 230.3 199 66.3
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 2.1e-58 229.6 190 63.2
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 6.2e-58 228.0 159 73.6
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 6.2e-58 228.0 159 73.6
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.4e-57 226.9 210 60.0
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 1.8e-57 226.5 168 71.4
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 4.0e-57 225.3 137 81.0
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 4.0e-57 225.3 137 81.0
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 5.2e-57 224.9 137 81.0
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 5.2e-57 224.9 137 81.0
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 7.6e-56 221.1 198 62.1
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 7.6e-56 221.1 133 79.7
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.3e-55 220.3 169 65.7
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 3.8e-55 218.8 117 88.0
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 6.0e-53 211.5 144 75.0
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 6.0e-53 211.5 192 59.4
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 6.6e-52 208.0 163 68.1
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.1e-51 207.2 192 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 5.8e-48 194.9 132 67.4
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 5.8e-48 194.9 130 74.6
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.9e-46 189.9 137 72.3
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 2.4e-46 189.5 178 57.3
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 2.1e-45 186.4 113 76.1
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 6.0e-45 184.9 113 77.0
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 1.7e-44 183.3 123 69.9
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 3.9e-44 182.2 155 60.0
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 4.9e-39 165.2 158 59.5
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 2.1e-37 159.8 110 63.6
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 2.5e-35 152.9 194 50.0
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 2.0e-24 116.7 131 40.5
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.1e-19 100.9 112 42.0
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 9.0e-17 91.3 107 43.0
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 1.3e-15 87.4 48 81.2
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.7e-15 87.0 120 33.3


User provided reference genes

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