Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-50 202.2 99 100.0
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.5e-44 182.6 99 90.9
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.7e-44 180.6 99 90.9
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.8e-44 179.9 99 90.9
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.8e-44 179.9 99 90.9
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.8e-44 179.9 99 90.9
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 8.3e-43 176.8 99 89.9
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.8e-42 175.6 98 88.8
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.0e-21 104.8 71 76.1
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.5e-20 102.8 70 74.3
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 3.7e-19 98.2 74 64.9
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 3.7e-19 98.2 96 55.2
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 4.9e-19 97.8 71 67.6
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 8.3e-19 97.1 71 66.2
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.1e-18 96.7 71 67.6
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.9e-18 95.9 70 68.6
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.9e-18 95.9 70 68.6
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 4.1e-18 94.7 71 63.4
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 4.1e-18 94.7 71 64.8
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 7.0e-18 94.0 70 64.3
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 9.2e-18 93.6 71 63.4
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.2e-18 93.6 72 69.4
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 1.2e-17 93.2 92 56.5
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 2.7e-17 92.0 70 61.4
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.7e-17 92.0 70 67.1
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 4.6e-17 91.3 101 51.5
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 4.6e-17 91.3 101 51.5
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 6.0e-17 90.9 104 51.0
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 1.0e-16 90.1 101 50.5
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.3e-16 89.7 70 62.9
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 1.3e-16 89.7 101 51.5
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.7e-16 89.4 71 64.8
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.3e-16 89.0 70 62.9
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.9e-16 88.2 70 61.4
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 3.9e-16 88.2 70 60.0
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 5.0e-16 87.8 90 52.2
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 5.0e-16 87.8 92 54.3
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 6.6e-16 87.4 74 62.2
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 8.6e-16 87.0 90 52.2
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 1.1e-15 86.7 90 51.1
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.1e-15 86.7 70 61.4
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.1e-15 86.7 74 60.8
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.5e-15 86.3 104 49.0
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 1.9e-15 85.9 70 60.0
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 2.5e-15 85.5 71 63.4
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 2.5e-15 85.5 103 47.6
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 3.3e-15 85.1 101 52.5
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 3.3e-15 85.1 90 50.0
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 3.3e-15 85.1 70 58.6
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 4.3e-15 84.7 74 60.8
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 7.3e-15 84.0 104 48.1
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 9.5e-15 83.6 74 59.5
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 9.5e-15 83.6 86 53.5
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 9.5e-15 83.6 90 51.1
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 9.5e-15 83.6 69 62.3
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 9.5e-15 83.6 70 61.4
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.2e-14 83.2 90 50.0
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 1.2e-14 83.2 71 59.2
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.2e-14 83.2 66 63.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.6e-14 82.8 70 60.0
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.6e-14 82.8 74 58.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.6e-14 82.8 74 59.5
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.6e-14 82.8 74 56.8
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 2.1e-14 82.4 74 56.8
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 2.1e-14 82.4 74 58.1
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 2.1e-14 82.4 61 67.2
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 2.1e-14 82.4 70 60.0
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 2.8e-14 82.0 71 60.6
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 2.8e-14 82.0 70 60.0
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 3.6e-14 81.6 70 60.0
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-14 81.6 70 60.0
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 3.6e-14 81.6 70 60.0
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 3.6e-14 81.6 71 59.2
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 3.6e-14 81.6 60 65.0
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 3.6e-14 81.6 70 60.0
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 4.7e-14 81.3 71 59.2
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 4.7e-14 81.3 71 59.2
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 6.2e-14 80.9 70 58.6
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.2e-14 80.9 70 58.6
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 6.2e-14 80.9 70 58.6
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 6.2e-14 80.9 70 60.0
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.1e-14 80.5 70 58.6
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.1e-14 80.5 70 58.6
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 8.1e-14 80.5 70 58.6
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 1.1e-13 80.1 101 46.5
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 1.1e-13 80.1 70 60.0
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 1.1e-13 80.1 74 55.4
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.4e-13 79.7 70 58.6
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.4e-13 79.7 74 56.8
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.8e-13 79.3 71 56.3
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 2.3e-13 79.0 70 58.6
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 3.1e-13 78.6 101 42.6
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 3.1e-13 78.6 69 58.0
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 4.0e-13 78.2 74 55.4
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 4.0e-13 78.2 74 54.1
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 5.2e-13 77.8 70 55.7
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 6.8e-13 77.4 89 48.3
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 6.8e-13 77.4 61 62.3
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 6.8e-13 77.4 74 54.1
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 6.8e-13 77.4 74 55.4
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 1.2e-12 76.6 66 60.6
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 1.2e-12 76.6 69 56.5
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.2e-12 76.6 57 66.7
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 2.6e-12 75.5 90 50.0
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 4.4e-12 74.7 71 53.5
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 1.7e-11 72.8 72 51.4
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.2e-11 72.4 61 52.5
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 2.2e-11 72.4 71 52.1
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 1.9e-10 69.3 61 55.7
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.3e-08 63.2 71 50.7
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.9e-07 59.3 60 45.0
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.2e-06 56.6 69 43.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 2.8e-06 55.5 59 50.8


User provided reference genes

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