Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR607G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-34 148.7 78 100.0
TAR696G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.8e-15 83.2 74 59.5
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 2.5e-10 68.6 75 49.3
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-09 66.2 80 45.0
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-09 65.9 52 53.8
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-09 65.5 76 43.4
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.6e-09 64.7 78 50.0
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 8.0e-09 63.5 78 46.2
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-08 63.2 74 44.6
Oeu021500.1 Olea europaea HOM05D000002 ORTHO05D000001 1.4e-08 62.8 41 65.9
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 1.8e-08 62.4 76 46.1
Oeu005617.1 Olea europaea HOM05D000002 ORTHO05D000001 1.8e-08 62.4 56 50.0
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 1.8e-08 62.4 56 50.0
Oeu059914.1 Olea europaea HOM05D000002 ORTHO05D000001 1.8e-08 62.4 56 50.0
CSS0001687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.0 74 44.6
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-08 62.0 68 54.4
Oeu032551.1 Olea europaea HOM05D000002 ORTHO05D000001 3.1e-08 61.6 69 50.7
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-08 61.6 72 48.6
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 4.0e-08 61.2 76 46.1
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.0e-08 61.2 76 50.0
Atru.chr4.967 Acer truncatum HOM05D000002 ORTHO05D000001 5.2e-08 60.8 66 50.0
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-08 60.8 79 48.1
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-08 60.8 69 44.9
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 5.2e-08 60.8 77 46.8
CSS0007683 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-08 60.5 70 44.3
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 6.8e-08 60.5 71 43.7
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.9e-08 60.1 77 44.2
Hma1.2p1_1768F.1_g301510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.9e-08 60.1 77 44.2
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.9e-08 60.1 77 44.2
Hma1.2p1_3787F.1_g337600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.9e-08 60.1 77 44.2
Oeu018031.1 Olea europaea HOM05D000002 ORTHO05D000001 8.9e-08 60.1 56 46.4
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.9e-08 60.1 86 41.9
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-07 59.7 73 47.9
ECA233G0266 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 59.3 71 47.9
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 1.5e-07 59.3 72 44.4
Hma1.2p1_2159F.1_g315520 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-07 59.3 68 44.1
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-07 59.3 56 48.2
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 54 57.4
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 2.0e-07 58.9 64 43.8
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 2.0e-07 58.9 63 47.6
Cpa.g.sc3.286 Carica papaya HOM05D000002 ORTHO05D000001 2.6e-07 58.5 78 44.9
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-07 58.5 67 41.8
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-07 58.5 68 48.5
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 2.6e-07 58.5 40 62.5
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 3.4e-07 58.2 65 46.2
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 3.4e-07 58.2 76 44.7
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 57.8 70 45.7
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 4.4e-07 57.8 57 50.9
SHI29921 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-07 57.8 56 53.6
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 57.4 73 45.2
HanXRQChr17g0541461 Helianthus annuus HOM05D000002 ORTHO05D000001 5.8e-07 57.4 72 44.4
Hma1.2p1_0198F.1_g085460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-07 57.4 66 47.0
Hma1.2p1_2372F.1_g320810 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-07 57.4 68 42.6
Hma1.2p1_2923F.1_g330370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-07 57.4 68 42.6
Hma1.2p1_3198F.1_g333876 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-07 57.4 68 42.6
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 5.8e-07 57.4 40 60.0
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.8e-07 57.4 73 45.2
Oeu058588.1 Olea europaea HOM05D000002 ORTHO05D000001 7.5e-07 57.0 40 60.0
TAR492G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.5e-07 57.0 71 47.9
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 56.6 65 47.7
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 9.8e-07 56.6 40 62.5
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-06 56.2 71 42.3
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 1.3e-06 56.2 80 45.0
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-06 56.2 81 39.5
VMungo0251G0530 Vigna mungo HOM05D000002 ORTHO05D037837 1.3e-06 56.2 58 41.4
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.7e-06 55.8 78 47.4
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 1.7e-06 55.8 77 46.8
TAR207G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.7e-06 55.8 55 52.7
MELO3C029684.2 Cucumis melo HOM05D011982 ORTHO05D000001 2.2e-06 55.5 60 45.0
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-06 55.5 71 42.3
Hma1.2p1_1446F.1_g283970 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-06 55.5 77 40.3
Prupe.2G201300 Prunus persica HOM05D000010 ORTHO05D000001 2.2e-06 55.5 66 43.9
TAR627G0632 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.2e-06 55.5 65 46.2
PSO013G0223 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-06 55.1 72 40.3
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 54.7 54 46.3
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 3.7e-06 54.7 73 45.2
ECA232G3680 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 54.7 71 43.7
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 3.7e-06 54.7 39 66.7
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.7e-06 54.7 67 41.8
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.7e-06 54.7 62 45.2
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-06 54.3 74 43.2
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-06 54.3 74 43.2
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-06 54.3 74 43.2
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 4.9e-06 54.3 69 44.9
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 4.9e-06 54.3 76 43.4
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.4e-06 53.9 72 40.3
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-06 53.9 67 38.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 6.4e-06 53.9 72 41.7
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-06 53.5 71 38.0
Hma1.2p1_0570F.1_g180480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.3e-06 53.5 73 39.7


User provided reference genes

Program Settings