Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 2.3e-81 305.4 149 100.0
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.6e-34 148.7 74 91.9
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 3.6e-18 95.5 92 48.9
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 4.8e-18 95.1 92 46.7
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.4e-17 93.6 92 48.9
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 4.0e-17 92.0 92 48.9
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 5.3e-17 91.7 92 50.0
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.4e-16 89.0 81 53.1
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.1e-14 84.0 103 40.8
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 1.9e-14 83.2 94 46.8
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 7.9e-13 77.8 92 41.3
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 7.9e-13 77.8 92 41.3
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 1.0e-12 77.4 141 30.5
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 8.7e-12 74.3 91 42.9
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.5e-11 73.6 91 42.9
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 2.5e-11 72.8 104 38.5
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 3.3e-11 72.4 92 40.2
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 7.4e-11 71.2 119 37.0
Nitab4.5_0000662g0020 Nicotiana tabacum HOM05D008666 ORTHO05D009871 7.4e-11 71.2 92 43.5
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 9.6e-11 70.9 99 38.4
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 6.2e-10 68.2 81 44.4
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 6.2e-10 68.2 80 36.2
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.4e-09 67.0 105 35.2
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.4e-09 66.2 92 44.6
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 2.4e-09 66.2 142 32.4
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 2.4e-09 66.2 96 36.5
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 6.9e-09 64.7 92 39.1
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 2.0e-08 63.2 85 41.2
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 2.0e-08 63.2 91 39.6
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 2.6e-08 62.8 145 29.7
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 4.5e-08 62.0 92 37.0
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 7.6e-08 61.2 96 35.4
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 3.8e-07 58.9 87 41.4
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 6.4e-07 58.2 104 33.7
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 1.9e-06 56.6 106 34.0


User provided reference genes

Program Settings