Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 9.0e-84 313.5 157 100.0
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 9.0e-84 313.5 157 100.0
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 2.5e-57 225.7 157 75.2
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 1.8e-44 183.0 160 56.9
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 2.4e-44 182.6 161 58.4
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 5.3e-44 181.4 164 64.0
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 3.4e-43 178.7 161 59.0
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 5.0e-42 174.9 159 57.9
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 8.5e-42 174.1 156 55.1
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 1.1e-41 173.7 157 54.8
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 1.9e-41 172.9 158 58.2
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 3.2e-41 172.2 160 54.4
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 4.2e-41 171.8 161 57.8
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 4.2e-41 171.8 156 56.4
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 5.5e-41 171.4 160 55.6
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 7.2e-41 171.0 159 58.5
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 7.2e-41 171.0 163 58.3
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 9.4e-41 170.6 164 57.3
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 2.7e-40 169.1 160 55.0
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.4e-39 166.8 162 55.6
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 1.8e-39 166.4 160 58.8
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.3e-39 166.0 162 55.6
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 3.0e-39 165.6 163 55.2
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.5e-38 163.3 162 54.3
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.6e-38 162.5 160 56.2
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 2.6e-38 162.5 160 56.2
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 1.1e-36 157.1 159 54.1
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 1.4e-36 156.8 158 53.8
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 3.1e-36 155.6 157 54.8
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 4.1e-36 155.2 170 52.4
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.2e-35 153.7 166 51.8
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 1.2e-35 153.7 157 49.7
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.6e-35 153.3 166 53.0
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.6e-35 152.5 166 51.8
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 3.5e-35 152.1 158 50.6
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 4.5e-35 151.8 160 49.4
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 5.9e-35 151.4 157 51.0
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 5.9e-35 151.4 157 51.0
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 7.7e-35 151.0 167 47.9
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.0e-34 150.6 161 52.8
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 1.0e-34 150.6 161 49.1
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 1.7e-34 149.8 160 53.1
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 2.2e-34 149.4 156 54.5
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 2.2e-34 149.4 170 46.5
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 2.9e-34 149.1 161 51.6
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 8.5e-34 147.5 163 54.6
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 8.5e-34 147.5 166 47.0
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 8.5e-34 147.5 167 47.3
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.5e-33 146.7 161 50.9
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 1.5e-33 146.7 166 47.0
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 1.9e-33 146.4 161 51.6
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 1.9e-33 146.4 161 50.3
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 1.9e-33 146.4 159 49.7
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 3.2e-33 145.6 161 50.3
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 4.2e-33 145.2 164 48.8
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 5.5e-33 144.8 161 50.9
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 5.5e-33 144.8 161 50.9
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 5.5e-33 144.8 161 50.9
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 1.6e-32 143.3 163 49.1
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.6e-32 143.3 156 51.9
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 1.6e-32 143.3 164 53.7
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 2.1e-32 142.9 163 49.1
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 2.1e-32 142.9 159 48.4
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 2.7e-32 142.5 165 50.3
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 3.6e-32 142.1 158 50.0
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 3.6e-32 142.1 158 49.4
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 6.1e-32 141.4 162 48.8
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 6.1e-32 141.4 154 55.2
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 6.1e-32 141.4 161 46.6
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 8.0e-32 141.0 159 50.3
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 8.0e-32 141.0 163 46.6
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 2.3e-31 139.4 175 47.4
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 2.3e-31 139.4 164 50.6
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 4.0e-31 138.7 151 51.0
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 5.2e-31 138.3 159 47.8
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 6.7e-31 137.9 157 49.0
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 8.8e-31 137.5 168 50.0
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.5e-30 136.7 162 47.5
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 1.5e-30 136.7 156 47.4
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 2.0e-30 136.3 165 47.3
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 3.3e-30 135.6 160 47.5
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 3.3e-30 135.6 159 47.8
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 4.4e-30 135.2 161 49.7
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 9.7e-30 134.0 163 50.3
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 2.8e-29 132.5 158 47.5
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 1.1e-28 130.6 158 46.8
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 1.4e-28 130.2 158 44.9
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 2.4e-28 129.4 138 52.2
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 2.4e-28 129.4 155 47.1
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 3.1e-28 129.0 155 47.1
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 4.1e-28 128.6 150 51.3
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 4.1e-28 128.6 158 48.7
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 4.1e-28 128.6 160 48.1
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 9.1e-28 127.5 164 45.7
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 1.2e-27 127.1 167 43.1
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 1.2e-27 127.1 161 46.0
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 1.6e-27 126.7 198 45.5
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 1.6e-27 126.7 160 47.5
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 2.0e-27 126.3 160 43.8
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 4.5e-27 125.2 168 46.4
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 4.5e-27 125.2 155 44.5
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 7.7e-27 124.4 163 47.2
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.2e-24 117.1 157 41.4
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.6e-24 116.7 157 41.4
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 1.6e-24 116.7 169 41.4
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 6.1e-24 114.8 169 41.4
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 1.7e-21 106.7 144 45.8
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 4.8e-21 105.1 173 41.6
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 4.7e-16 88.6 169 37.3
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 8.0e-16 87.8 169 35.5
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 1.8e-15 86.7 174 36.2
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 1.8e-15 86.7 174 36.2
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 3.0e-15 85.9 174 35.6
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 3.0e-15 85.9 174 36.2
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 5.2e-15 85.1 161 36.6
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 1.2e-14 84.0 176 36.4
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 1.5e-14 83.6 170 35.9
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 2.6e-14 82.8 176 34.1
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 2.6e-14 82.8 175 35.4
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 4.4e-14 82.0 130 39.2
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 4.4e-14 82.0 169 36.1
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 1.7e-13 80.1 173 35.8
Actinidia21410 Actinidia chinensis HOM05D000446 ORTHO05D000321 1.8e-12 76.6 91 54.9
HPP92_018375 Vanilla planifolia HOM05D006641 ORTHO05D007573 2.4e-12 76.3 158 37.3
Zm00001eb396340 Zea mays HOM05D006641 ORTHO05D007573 2.4e-12 76.3 174 33.9
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 7.0e-12 74.7 176 34.1
Os03g0305200 Oryza sativa ssp. japonica HOM05D006641 ORTHO05D007573 8.6e-10 67.8 175 32.6
CDE05G1007 Ceratophyllum demersum HOM05D006641 ORTHO05D007573 1.6e-08 63.5 82 46.3
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 3.0e-07 59.3 149 31.5
CANSAT78G1422 Cannabis sativa HOM05D001935 ORTHO05D001700 4.0e-07 58.9 154 34.4
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.2e-06 57.4 152 30.9
SalBow6G0372 Salvia bowleyana HOM05D006641 ORTHO05D007573 3.4e-06 55.8 62 43.5
Ciclev10012926m.g Citrus clementina HOM05D001935 ORTHO05D001700 9.8e-06 54.3 145 31.0


User provided reference genes

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