Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.0e-67 260.0 136 100.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.8e-40 169.5 91 98.9
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.2e-28 130.2 114 67.5
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 2.2e-25 119.4 115 60.9
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.8e-25 119.0 114 61.4
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.7e-25 118.6 114 61.4
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 3.7e-25 118.6 114 60.5
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.4e-24 115.9 113 59.3
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.3e-24 114.8 114 58.8
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.3e-24 114.8 114 58.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 9.0e-24 114.0 114 59.6
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.2e-23 113.6 114 56.1
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.0e-23 112.8 114 57.0
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.6e-23 112.5 115 56.5
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 5.9e-23 111.3 115 57.4
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.3e-22 110.2 114 54.4
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.3e-22 110.2 114 55.3
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 2.2e-22 109.4 115 56.5
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.2e-22 109.4 114 57.0
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 2.9e-22 109.0 114 54.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 3.8e-22 108.6 114 56.1
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.0e-22 108.2 114 54.4
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 6.5e-22 107.8 114 55.3
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 8.5e-22 107.5 124 51.6
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 1.1e-21 107.1 114 53.5
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.4e-21 106.7 115 51.3
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 3.2e-21 105.5 114 53.5
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.2e-21 105.5 114 53.5
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 4.2e-21 105.1 114 52.6
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 5.5e-21 104.8 115 51.3
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 7.2e-21 104.4 114 54.4
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 7.2e-21 104.4 115 53.9
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 9.4e-21 104.0 115 52.2
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.2e-20 103.6 114 51.8
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 2.1e-20 102.8 114 56.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.7e-20 102.4 115 50.4
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 3.6e-20 102.1 115 52.2
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 4.6e-20 101.7 114 52.6
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 4.6e-20 101.7 114 53.5
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 4.6e-20 101.7 114 54.4
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 6.1e-20 101.3 115 55.7
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.9e-20 100.9 115 49.6
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 7.9e-20 100.9 115 49.6
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 2.3e-19 99.4 114 50.0
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 3.9e-19 98.6 116 48.3
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 5.1e-19 98.2 114 51.8
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 5.1e-19 98.2 114 51.8
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 8.8e-19 97.4 115 48.7
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 2.5e-18 95.9 115 47.0
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.5e-18 95.9 117 48.7
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 2.5e-18 95.9 116 45.7
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.3e-18 95.5 115 48.7
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 9.7e-18 94.0 115 47.8
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 2.2e-17 92.8 115 48.7
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.8e-17 92.4 121 48.8
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 4.8e-17 91.7 115 47.0
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 8.2e-17 90.9 115 50.4
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.1e-16 90.5 115 46.1
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.4e-16 90.1 114 48.2
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.4e-16 90.1 115 47.0
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 3.1e-16 89.0 114 43.9
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 3.1e-16 89.0 114 50.0
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 5.3e-16 88.2 115 48.7
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.2e-15 87.0 114 46.5
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.5e-15 86.7 116 44.8
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.4e-15 85.5 115 46.1
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 5.9e-15 84.7 116 40.5
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 7.7e-15 84.3 119 41.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.7e-14 83.2 116 39.7
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.7e-14 83.2 115 46.1
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 2.2e-14 82.8 116 39.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 2.2e-14 82.8 119 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.8e-14 82.0 112 43.8
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.1e-13 80.5 116 39.7
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.4e-13 80.1 114 42.1
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.5e-13 79.3 115 40.9
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 3.2e-13 79.0 116 37.9
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 4.2e-13 78.6 115 43.5
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 5.5e-13 78.2 116 37.1
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 7.2e-13 77.8 113 39.8
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 9.4e-13 77.4 115 41.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 6.1e-12 74.7 113 38.1
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.8e-11 73.2 113 37.2
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 5.1e-11 71.6 113 36.3
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 5.1e-11 71.6 82 52.4
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.1e-10 70.5 56 67.9
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.5e-10 70.1 56 62.5
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 5.7e-10 68.2 114 37.7
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 7.4e-10 67.8 116 38.8
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 2.2e-09 66.2 56 58.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 6.3e-09 64.7 115 40.0
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 4.1e-08 62.0 119 33.6
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.1e-08 62.0 53 62.3
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 5.3e-08 61.6 56 58.9
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.5e-07 60.1 117 40.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 5.0e-06 55.1 56 55.4


User provided reference genes

Program Settings