Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.2e-191 672.9 328 100.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 5.4e-131 471.5 299 75.9
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 5.6e-120 434.9 313 70.6
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.2e-117 427.2 308 68.2
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 2.6e-109 399.4 329 59.6
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.3e-108 397.1 325 60.9
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 5.4e-107 391.7 324 60.8
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 5.4e-107 391.7 314 61.1
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.1e-104 384.0 317 61.2
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 8.1e-103 377.9 344 54.4
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 2.0e-101 373.2 308 60.7
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.6e-101 372.9 327 56.9
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.8e-101 371.7 308 60.4
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 9.9e-101 370.9 314 57.3
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 4.9e-100 368.6 307 61.6
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 4.9e-100 368.6 322 59.0
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 6.4e-100 368.2 368 51.1
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.4e-99 367.1 293 60.4
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.4e-99 367.1 309 59.2
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.4e-99 367.1 333 56.2
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 2.4e-99 366.3 346 54.0
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 2.4e-99 366.3 318 57.2
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 3.2e-99 365.9 308 58.4
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 5.4e-99 365.2 338 55.3
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.6e-98 363.6 353 53.3
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 3.5e-98 362.5 360 51.9
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 7.8e-98 361.3 333 54.7
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-97 360.1 350 52.3
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.7e-97 360.1 316 57.0
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 6.6e-97 358.2 326 57.7
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 8.7e-97 357.8 318 56.0
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 1.9e-96 356.7 319 55.2
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 4.3e-96 355.5 326 55.5
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 4.8e-95 352.1 324 57.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 1.5e-93 347.1 319 55.8
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 9.9e-93 344.4 315 55.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.3e-92 344.0 322 55.3
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 2.9e-92 342.8 304 56.2
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 8.4e-92 341.3 316 54.4
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.1e-91 340.9 381 48.0
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 3.2e-91 339.3 361 50.7
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 5.4e-91 338.6 311 55.0
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 9.3e-91 337.8 295 58.6
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.2e-90 337.4 318 56.3
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.2e-90 337.4 318 53.8
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 2.1e-90 336.7 297 55.9
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 3.5e-90 335.9 305 54.1
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.3e-89 333.2 346 52.3
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 2.3e-89 333.2 340 50.0
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 3.9e-89 332.4 306 53.6
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.1e-88 330.9 318 52.5
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.5e-88 329.7 316 55.4
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 5.6e-88 328.6 345 50.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.4e-88 328.2 293 57.3
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.8e-87 326.2 300 56.7
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 6.2e-87 325.1 319 53.3
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 8.1e-87 324.7 324 51.5
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.4e-86 323.9 327 53.8
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 4.0e-86 322.4 297 57.9
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-85 320.5 295 55.6
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 3.4e-85 319.3 325 50.8
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 2.9e-84 316.2 354 50.6
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 3.8e-84 315.8 317 52.1
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.1e-83 314.3 245 62.9
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.4e-83 313.9 318 50.6
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.2e-83 312.4 316 51.3
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.6e-82 310.5 329 51.1
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 4.6e-82 308.9 315 51.4
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.9e-82 308.1 337 52.5
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 3.0e-81 306.2 319 49.8
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 6.7e-81 305.1 323 50.5
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 1.1e-80 304.3 334 49.1
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.9e-80 303.5 307 51.8
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.3e-80 302.4 292 55.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 8.1e-79 298.1 334 47.0
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.6e-77 293.1 339 48.7
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 2.6e-77 293.1 339 48.7
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 4.5e-77 292.4 339 48.7
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 7.1e-75 285.0 360 42.8
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.2e-74 284.3 319 48.0
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 1.6e-74 283.9 321 48.9
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 3.5e-74 282.7 337 47.5
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.5e-72 277.3 323 47.7
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 1.5e-72 277.3 345 46.7
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 3.3e-72 276.2 345 46.4
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.6e-71 273.9 258 54.7
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 1.1e-70 271.2 377 43.5
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.4e-70 270.8 347 46.1
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 2.4e-70 270.0 340 45.6
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.4e-70 270.0 330 43.9
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 3.1e-70 269.6 344 45.6
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 3.1e-70 269.6 347 45.5
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 3.1e-70 269.6 347 45.5
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 3.1e-70 269.6 347 45.5
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.1e-70 269.2 330 43.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 6.9e-70 268.5 347 45.5
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 6.9e-70 268.5 312 47.1
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.0e-68 264.6 358 42.7
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.0e-68 264.6 292 49.7
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.9e-68 263.1 314 44.3
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 6.5e-68 261.9 328 45.7
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 2.1e-66 256.9 383 40.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 6.1e-66 255.4 316 46.8
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 6.7e-65 251.9 336 43.2
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 6.3e-63 245.4 339 41.9
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.1e-56 224.6 305 40.3
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 8.2e-55 218.4 342 40.6
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 2.4e-54 216.9 298 43.3
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 8.5e-52 208.4 329 38.3
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.6e-50 204.1 209 51.7
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 3.6e-50 203.0 390 34.9
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.3e-48 196.4 212 49.5
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.8e-46 190.7 129 65.9
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 9.1e-46 188.3 322 37.0
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.9e-44 183.3 301 38.5
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 3.8e-44 183.0 272 39.3
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.1e-43 181.4 142 62.7
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.3e-39 167.9 129 61.2
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 2.1e-34 150.6 291 33.0
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.0e-33 148.3 304 34.5
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 6.8e-33 145.6 281 34.5
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 3.7e-31 139.8 157 43.9
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 8.3e-31 138.7 303 32.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 4.0e-25 119.8 301 30.6
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 2.8e-23 113.6 152 42.1
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.2e-22 108.6 134 44.0
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.5e-16 91.3 218 31.2
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 4.1e-14 83.2 67 59.7
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.0e-08 64.3 121 32.2
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 6.4e-07 59.3 49 51.0
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 8.3e-07 58.9 111 38.7
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 8.3e-07 58.9 111 38.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 8.3e-07 58.9 115 35.7
Pp3c1_6510 Physcomitrium patens HOM05D021038 ORTHO05D009018 1.1e-06 58.5 116 40.5
Pp3c7_26210 Physcomitrium patens HOM05D021038 ORTHO05D009018 1.9e-06 57.8 115 37.4


User provided reference genes

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