Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.8e-35 151.0 78 100.0
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.3e-30 133.7 78 91.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.7e-20 100.1 78 71.8
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.3e-18 94.7 78 65.4
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.2e-16 87.4 78 62.8
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.2e-16 87.4 78 62.8
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 1.3e-14 82.8 75 60.0
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 3.7e-14 81.3 72 62.5
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 6.3e-14 80.5 79 60.8
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.4e-13 78.6 73 57.5
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.2e-13 78.2 79 58.2
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 5.4e-13 77.4 62 67.7
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 5.4e-13 77.4 79 54.4
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 7.0e-13 77.0 79 55.7
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.2e-12 76.3 78 55.1
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.7e-11 72.4 83 53.0
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.7e-11 72.4 83 53.0
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 6.6e-11 70.5 78 53.8
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.5e-10 69.3 78 50.0
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.5e-10 69.3 78 50.0
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 1.5e-10 69.3 79 50.6
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 3.3e-10 68.2 70 57.1
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 7.3e-10 67.0 69 53.6
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.2e-09 66.2 74 51.4
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.6e-09 65.9 78 53.8
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 2.1e-09 65.5 69 52.2
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.8e-09 65.1 79 51.9
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.8e-09 65.1 79 51.9
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 4.7e-09 64.3 78 52.6
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 6.2e-09 63.9 73 56.2
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 6.2e-09 63.9 78 52.6
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 1.0e-08 63.2 78 52.6
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 1.8e-08 62.4 69 50.7
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 1.8e-08 62.4 68 52.9
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 6.8e-08 60.5 69 49.3
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 8.9e-08 60.1 61 57.4
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.2e-07 59.7 78 50.0
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 1.2e-07 59.7 62 54.8
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.5e-07 59.3 60 58.3
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.0e-07 58.9 60 56.7
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 2.6e-07 58.5 83 54.2
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.4e-07 57.8 81 51.9
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 5.8e-07 57.4 80 50.0
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 7.5e-07 57.0 78 47.4
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 9.8e-07 56.6 57 56.1
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.3e-06 56.2 81 49.4
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.3e-06 56.2 81 50.6
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.2e-06 55.5 69 47.8
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 2.2e-06 55.5 67 49.3
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.3e-06 53.5 81 49.4


User provided reference genes

Program Settings