Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.7e-100 368.2 187 100.0
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.7e-100 368.2 187 100.0
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 8.7e-94 347.1 192 94.3
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 1.5e-82 309.7 185 81.6
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 2.0e-82 309.3 185 82.2
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 2.0e-82 309.3 185 82.2
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 3.4e-82 308.5 184 82.6
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 2.9e-81 305.4 185 80.5
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 5.0e-81 304.7 185 82.2
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 3.6e-79 298.5 185 77.3
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 6.1e-79 297.7 185 78.9
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 7.9e-79 297.4 182 79.7
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 1.0e-78 297.0 185 78.9
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 1.0e-78 297.0 185 78.9
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 1.4e-78 296.6 182 79.1
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 1.4e-78 296.6 185 78.9
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 2.3e-78 295.8 185 78.4
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 5.1e-78 294.7 182 78.6
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 1.3e-76 290.0 205 70.7
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 2.2e-76 289.3 185 75.7
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 2.2e-76 289.3 185 75.7
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 2.2e-76 289.3 185 75.7
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 2.2e-76 289.3 185 76.2
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 2.8e-76 288.9 185 76.2
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 4.8e-76 288.1 185 76.8
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 3.1e-75 285.4 184 76.1
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 4.1e-75 285.0 185 74.6
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 4.1e-75 285.0 185 76.2
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 9.1e-75 283.9 184 76.6
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.5e-74 283.1 185 73.5
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 2.0e-74 282.7 186 75.3
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 2.6e-74 282.3 185 75.1
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 2.6e-74 282.3 185 74.6
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 2.6e-74 282.3 185 74.1
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 3.4e-74 282.0 184 74.5
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 4.5e-74 281.6 200 71.0
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 5.9e-74 281.2 184 75.5
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 5.9e-74 281.2 185 74.6
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 7.7e-74 280.8 185 73.0
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 1.7e-73 279.6 186 71.5
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 2.2e-73 279.3 184 72.8
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 2.2e-73 279.3 182 72.0
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 8.5e-73 277.3 185 71.9
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 8.5e-73 277.3 185 74.1
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 1.1e-72 276.9 182 73.1
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.4e-72 276.6 186 73.7
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 1.4e-72 276.6 185 71.4
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 1.9e-72 276.2 186 74.2
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 2.5e-72 275.8 185 71.9
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 3.2e-72 275.4 185 74.6
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 2.7e-71 272.3 206 68.4
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 6.1e-71 271.2 185 70.3
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 6.1e-71 271.2 182 73.6
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 7.9e-71 270.8 181 74.0
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 7.9e-71 270.8 185 71.9
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 1.4e-70 270.0 185 69.7
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 1.4e-70 270.0 182 73.6
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 1.4e-70 270.0 152 86.2
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 1.8e-70 269.6 174 73.0
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 1.1e-69 266.9 184 71.2
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 2.0e-69 266.2 186 69.4
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.0e-69 266.2 178 74.2
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.6e-69 265.8 178 74.2
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 2.6e-69 265.8 178 74.2
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 5.7e-69 264.6 185 69.7
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 9.7e-69 263.8 208 66.8
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 1.3e-68 263.5 174 73.6
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 4.8e-68 261.5 186 68.3
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 6.3e-68 261.2 156 82.7
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 1.1e-67 260.4 186 69.4
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 1.1e-67 260.4 186 68.8
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 1.4e-67 260.0 185 67.0
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.4e-67 260.0 178 72.5
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 2.4e-67 259.2 185 69.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.1e-67 258.8 184 67.9
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 7.0e-67 257.7 185 66.5
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 7.0e-67 257.7 174 71.3
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 1.2e-66 256.9 176 70.5
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.2e-66 256.9 178 71.3
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 2.0e-66 256.1 182 69.2
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 2.6e-66 255.8 185 67.0
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 2.6e-66 255.8 184 68.5
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 3.5e-66 255.4 178 71.9
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.5e-66 255.0 185 66.5
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 5.9e-66 254.6 185 67.6
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 1.0e-65 253.8 179 67.0
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 1.7e-65 253.1 188 67.6
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 2.2e-65 252.7 175 68.0
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 2.9e-65 252.3 188 67.0
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 2.9e-65 252.3 185 67.0
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 6.5e-65 251.1 185 67.0
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.6e-63 246.5 174 67.8
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 2.1e-63 246.1 182 64.3
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 3.6e-63 245.4 182 65.4
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 4.7e-63 245.0 270 51.9
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 2.3e-62 242.7 182 64.3
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 3.0e-62 242.3 174 67.2
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 4.8e-60 235.0 153 75.2
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 7.7e-58 227.6 161 70.2
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.9e-56 223.0 188 59.6
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 2.1e-55 219.5 181 57.5
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 2.2e-52 209.5 185 55.1
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 4.1e-51 205.3 182 54.4
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 2.7e-50 202.6 186 61.3
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 1.7e-49 199.9 185 53.0
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 5.0e-49 198.4 185 52.4
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 5.0e-49 198.4 207 53.1
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 1.5e-48 196.8 182 52.7
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 9.4e-48 194.1 185 52.4
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 1.4e-46 190.3 185 50.8
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 8.3e-44 181.0 182 50.5
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 2.4e-43 179.5 172 55.8
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 7.0e-43 177.9 182 50.5
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 5.9e-42 174.9 182 49.5
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 1.7e-41 173.3 182 48.9
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 1.7e-41 173.3 182 48.9
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 1.7e-41 173.3 182 48.9
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 3.8e-41 172.2 182 48.4
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 1.5e-40 170.2 106 81.1
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.3e-40 169.1 182 47.3
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.3e-40 169.1 182 47.3
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 2.6e-37 159.5 148 53.4
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 5.4e-35 151.8 155 56.8
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 3.3e-32 142.5 180 44.4
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.8e-30 136.7 109 65.1
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 2.0e-29 133.3 78 76.9
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 4.3e-24 115.5 100 64.0
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.2e-23 114.0 91 59.3
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 8.1e-23 111.3 83 66.3
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 1.1e-22 110.9 73 68.5
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 3.1e-22 109.4 77 75.3
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 5.2e-22 108.6 157 39.5
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 7.5e-21 104.8 163 38.0
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 3.7e-20 102.4 159 35.2
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 6.4e-20 101.7 85 57.6
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 8.3e-20 101.3 80 58.8
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 1.4e-19 100.5 118 43.2
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 2.4e-19 99.8 76 59.2
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 1.1e-16 90.9 59 71.2
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 8.1e-15 84.7 97 49.5
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 7.1e-11 71.6 89 48.3
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 6.0e-10 68.6 66 54.5
Zm00001eb076020 Zea mays HOM05D005262 ORTHO05D444176 3.6e-07 59.3 45 62.2


User provided reference genes

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