Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR482G0003 Trochodendron aralioides HOM05D000463 ORTHO05D051499 3.1e-26 120.9 57 100.0
TAR625G1459 Trochodendron aralioides HOM05D000463 ORTHO05D002084 2.8e-11 71.2 52 69.2
Gohir.A01G117400 Gossypium hirsutum HOM05D000463 ORTHO05D002084 1.7e-08 62.0 52 63.5
Gohir.D01G105700 Gossypium hirsutum HOM05D000463 ORTHO05D002084 1.7e-08 62.0 52 63.5
Gorai.002G129700 Gossypium raimondii HOM05D000463 ORTHO05D002084 1.7e-08 62.0 52 63.5
Gohir.D06G009700 Gossypium hirsutum HOM05D000463 ORTHO05D002084 2.2e-08 61.6 52 63.5
Gorai.010G012500 Gossypium raimondii HOM05D000463 ORTHO05D002084 2.2e-08 61.6 52 63.5
Nn1g05114 Nelumbo nucifera HOM05D000463 ORTHO05D002084 2.2e-08 61.6 52 63.5
Thecc.08G021700 Theobroma cacao HOM05D000463 ORTHO05D002084 2.2e-08 61.6 52 61.5
COL.COLO4_26380 Corchorus olitorius HOM05D000463 ORTHO05D002084 3.8e-08 60.8 52 59.6
Dinv36039 Davidia involucrata HOM05D000463 ORTHO05D002084 3.8e-08 60.8 52 61.5
Nn5g29488 Nelumbo nucifera HOM05D000463 ORTHO05D002084 6.5e-08 60.1 52 61.5
CSS0034911 Camellia sinensis var. sinensis HOM05D000463 ORTHO05D002084 8.5e-08 59.7 52 59.6
Duzib116G0145 Durio zibethinus HOM05D000463 ORTHO05D002084 8.5e-08 59.7 52 61.5
Manes.18G030200 Manihot esculenta HOM05D000463 ORTHO05D002084 8.5e-08 59.7 52 59.6
PSO700G0353 Papaver somniferum HOM05D000463 ORTHO05D002084 1.1e-07 59.3 55 58.2
TAR381G0092 Trochodendron aralioides HOM05D000463 ORTHO05D002084 1.1e-07 59.3 52 59.6
Atru.chr13.552 Acer truncatum HOM05D000463 ORTHO05D002084 1.4e-07 58.9 48 64.6
Duzib041G0402 Durio zibethinus HOM05D000463 ORTHO05D002084 1.4e-07 58.9 52 61.5
Prupe.7G148100 Prunus persica HOM05D000463 ORTHO05D002084 1.4e-07 58.9 52 57.7
GSVIVG01009643001 Vitis vinifera HOM05D000463 ORTHO05D002084 1.4e-07 58.9 52 59.6
Dinv39380 Davidia involucrata HOM05D000463 ORTHO05D002084 2.5e-07 58.2 51 58.8
Gohir.A06G012300 Gossypium hirsutum HOM05D000463 ORTHO05D002084 3.2e-07 57.8 52 61.5
PSO170G6598 Papaver somniferum HOM05D000463 ORTHO05D002084 3.2e-07 57.8 52 59.6
GSVIVG01031912001 Vitis vinifera HOM05D000463 ORTHO05D051499 3.2e-07 57.8 49 63.3
CiPaw.15G072100 Carya illinoinensis HOM05D000463 ORTHO05D002084 4.2e-07 57.4 52 59.6
Cc10_g03400 Coffea canephora HOM05D000463 ORTHO05D002084 4.2e-07 57.4 51 58.8
Lj2g0015558 Lotus japonicus HOM05D000463 ORTHO05D002084 4.2e-07 57.4 52 55.8
TWI56G0222 Tripterygium wilfordii HOM05D000463 ORTHO05D002084 4.2e-07 57.4 52 57.7
Sabra02G0103900 Salix brachista HOM05D000463 ORTHO05D002084 5.5e-07 57.0 52 61.5
Cpa.g.sc64.44 Carica papaya HOM05D000463 ORTHO05D002084 7.2e-07 56.6 52 57.7
Dinv39943 Davidia involucrata HOM05D000463 ORTHO05D002084 7.2e-07 56.6 51 54.9
Glyma.01G178600 Glycine max HOM05D000463 ORTHO05D002084 7.2e-07 56.6 52 55.8
Glyma.11G063500 Glycine max HOM05D000463 ORTHO05D002084 7.2e-07 56.6 52 55.8
Manes.05G163900 Manihot esculenta HOM05D000463 ORTHO05D002084 7.2e-07 56.6 51 58.8
QL02p007320 Quercus lobata HOM05D000463 ORTHO05D002084 7.2e-07 56.6 52 55.8
RcHm_v2.0_Chr2g0102791 Rosa chinensis HOM05D000463 ORTHO05D002084 7.2e-07 56.6 56 53.6
ClCG01G016230 Citrullus lanatus HOM05D000463 ORTHO05D002084 9.4e-07 56.2 51 54.9
Duzib093G2241 Durio zibethinus HOM05D000463 ORTHO05D002084 9.4e-07 56.2 52 57.7
Rhsim07G0235100 Rhododendron simsii HOM05D000463 ORTHO05D002084 9.4e-07 56.2 55 52.7
CiPaw.01G032000 Carya illinoinensis HOM05D000463 ORTHO05D002084 1.2e-06 55.8 52 57.7
Ciclev10002367m.g Citrus clementina HOM05D000463 ORTHO05D002084 1.2e-06 55.8 56 53.6
MBI16_g32008_MAGBIO Magnolia biondii HOM05D000463 ORTHO05D002084 1.2e-06 55.8 52 57.7
Potri.002G133000 Populus trichocarpa HOM05D000463 ORTHO05D002084 1.2e-06 55.8 52 59.6
Sabra14G0029500 Salix brachista HOM05D000463 ORTHO05D002084 1.2e-06 55.8 52 57.7
CANSAT01G2622 Cannabis sativa HOM05D000463 ORTHO05D002084 1.6e-06 55.5 52 53.8
Potri.014G040400 Populus trichocarpa HOM05D000463 ORTHO05D002084 1.6e-06 55.5 52 57.7
Aqoxy6G01006 Aquilegia oxysepala HOM05D000463 ORTHO05D002084 2.1e-06 55.1 50 58.0
Ca_24828_v3 Cicer arietinum L. HOM05D000463 ORTHO05D002084 2.1e-06 55.1 52 55.8
MD02G1155200 Malus domestica HOM05D000463 ORTHO05D002084 2.1e-06 55.1 50 56.0
Lj4P132T23 Lonicera japonica HOM05D000463 ORTHO05D002084 3.6e-06 54.3 56 50.0
Phvul.002G026100 Phaseolus vulgaris HOM05D000463 ORTHO05D002084 3.6e-06 54.3 52 53.8
TWI12G0515 Tripterygium wilfordii HOM05D000463 ORTHO05D002084 3.6e-06 54.3 52 53.8
VMungo1215G2019 Vigna mungo HOM05D000463 ORTHO05D002084 3.6e-06 54.3 52 53.8
CiPaw.02G014800 Carya illinoinensis HOM05D000463 ORTHO05D002084 4.7e-06 53.9 52 53.8
Prupe.1G384000 Prunus persica HOM05D000463 ORTHO05D002084 4.7e-06 53.9 48 58.3
CANSAT25G0879 Cannabis sativa HOM05D000463 ORTHO05D002084 6.1e-06 53.5 48 58.3
MELO3C007493.2 Cucumis melo HOM05D000463 ORTHO05D002084 6.1e-06 53.5 51 52.9
CsaV3_6G042520 Cucumis sativus L. HOM05D000463 ORTHO05D002084 6.1e-06 53.5 51 52.9
Haze_15142 Corylus avellana HOM05D000463 ORTHO05D002084 7.9e-06 53.1 51 56.9


User provided reference genes

Program Settings