Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.8e-125 452.6 230 100.0
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 5.7e-87 324.7 228 74.1
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 4.8e-86 321.6 257 66.9
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.2e-84 317.0 245 70.6
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.5e-84 315.1 243 71.2
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.2e-83 312.8 233 71.2
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.8e-83 312.0 260 67.3
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.1e-82 310.5 247 67.6
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.5e-82 310.1 235 69.4
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.9e-82 309.7 252 67.1
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 3.2e-82 308.9 240 67.9
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 7.2e-82 307.8 211 73.0
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 1.2e-81 307.0 185 81.1
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.6e-81 306.6 179 83.8
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 4.7e-81 305.1 233 70.0
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 8.0e-81 304.3 233 69.1
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 1.8e-80 303.1 223 69.5
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.8e-80 303.1 261 64.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.3e-80 302.8 259 66.4
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 8.8e-80 300.8 257 64.2
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 2.2e-78 296.2 201 75.1
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.8e-78 295.8 196 76.0
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 4.8e-78 295.0 196 76.0
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 6.3e-78 294.7 241 63.5
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 8.2e-78 294.3 238 64.7
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.8e-77 293.1 213 70.0
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.1e-77 292.4 221 70.1
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 4.1e-77 292.0 232 66.8
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 7.0e-77 291.2 212 71.7
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.6e-76 290.0 257 63.0
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.7e-76 289.3 176 77.3
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 2.7e-76 289.3 178 77.5
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 3.5e-76 288.9 203 72.9
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 4.5e-76 288.5 223 68.6
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 1.0e-75 287.3 186 79.0
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 2.2e-75 286.2 226 66.4
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 5.0e-75 285.0 214 70.1
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.1e-74 283.9 176 78.4
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.9e-74 283.1 228 64.0
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.9e-74 283.1 236 65.7
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.5e-74 282.7 226 61.9
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 3.2e-74 282.3 177 79.7
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 9.4e-74 280.8 238 66.0
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.2e-73 280.4 178 79.2
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.6e-73 280.0 237 64.1
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.1e-73 279.6 195 70.3
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.1e-73 279.6 187 72.7
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 2.1e-73 279.6 181 77.9
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.7e-73 279.3 177 78.0
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.7e-73 279.3 196 70.9
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 3.6e-73 278.9 178 74.7
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 8.0e-73 277.7 243 62.6
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.0e-72 277.3 171 78.4
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.4e-72 276.9 185 73.0
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 3.0e-72 275.8 180 76.7
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 4.0e-72 275.4 228 61.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 4.0e-72 275.4 178 78.7
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 5.2e-72 275.0 217 64.5
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 6.8e-72 274.6 185 70.3
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 8.8e-72 274.2 178 73.0
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 8.8e-72 274.2 178 78.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 8.8e-72 274.2 183 73.2
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 8.8e-72 274.2 226 63.7
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-71 273.9 196 69.4
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.5e-71 273.5 222 64.4
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.0e-71 273.1 193 70.5
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.0e-71 273.1 193 70.5
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 2.0e-71 273.1 162 82.1
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.0e-71 273.1 188 71.3
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.4e-71 272.3 196 72.4
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 3.4e-71 272.3 252 60.7
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 3.4e-71 272.3 234 64.1
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 7.5e-71 271.2 188 71.8
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 7.5e-71 271.2 227 61.2
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.7e-70 270.0 263 59.3
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.7e-70 270.0 233 61.4
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 2.8e-70 269.2 256 59.4
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 2.8e-70 269.2 178 71.3
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 3.7e-70 268.9 196 66.8
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 3.7e-70 268.9 169 78.1
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 4.8e-70 268.5 201 68.2
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 6.3e-70 268.1 193 69.4
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.1e-69 267.3 184 70.7
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.8e-69 266.5 239 59.4
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 4.1e-69 265.4 196 67.3
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 4.1e-69 265.4 196 67.3
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 9.1e-69 264.2 222 61.7
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 9.1e-69 264.2 197 67.5
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.6e-68 263.5 193 67.9
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.0e-68 263.1 178 69.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 3.5e-68 262.3 178 69.7
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 5.9e-68 261.5 178 69.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 5.9e-68 261.5 178 69.7
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 7.7e-68 261.2 222 61.3
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 6.6e-67 258.1 199 66.3
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 1.5e-66 256.9 231 58.9
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 3.6e-65 252.3 182 69.8
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 5.2e-64 248.4 184 67.4
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 6.8e-64 248.1 184 66.3
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-63 247.3 182 67.6
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 1.2e-63 247.3 271 54.6
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.7e-62 243.4 229 59.8
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 2.8e-62 242.7 171 68.4
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 6.3e-62 241.5 154 76.6
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.4e-61 239.6 144 82.6
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.8e-57 226.1 230 57.4
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.7e-57 225.3 186 61.3
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.8e-56 223.4 194 62.4
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.9e-54 216.1 178 61.2
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 3.7e-54 215.7 174 67.2
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 1.7e-51 206.8 128 78.9
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.9e-50 203.4 158 68.4
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 3.6e-49 199.1 127 76.4
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 2.0e-47 193.4 176 60.8
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 8.3e-46 188.0 172 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 1.6e-44 183.7 193 50.8
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 1.6e-44 183.7 145 60.7
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 2.1e-44 183.3 159 54.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 4.6e-44 182.2 173 55.5
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-43 180.6 128 66.4
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 6.6e-43 178.3 177 54.2
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.9e-42 176.8 95 89.5
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.9e-42 176.8 206 53.4
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 2.3e-35 153.3 167 53.9
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 3.9e-35 152.5 82 87.8
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 3.6e-33 146.0 145 60.0
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 2.7e-28 129.8 150 54.7
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.1e-21 107.8 134 47.8
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.0e-19 101.3 184 41.3
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.3e-14 84.3 187 29.9
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 9.3e-13 78.2 50 70.0
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 1.3e-11 74.3 107 47.7
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 9.6e-10 68.2 128 29.7
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 6.2e-09 65.5 36 69.4
Cfa005086 Carpinus fangiana HOM05D005796 ORTHO05D007054 7.6e-07 58.5 121 37.2


User provided reference genes

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