Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.8e-100 368.6 185 100.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.3e-61 238.4 194 63.4
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 2.1e-55 219.5 199 59.8
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.7e-55 219.2 197 60.9
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 8.7e-54 214.2 199 59.8
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.5e-53 212.6 201 59.2
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 3.3e-53 212.2 196 58.7
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 7.4e-53 211.1 196 60.2
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.8e-52 209.1 203 56.7
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 3.7e-52 208.8 206 54.9
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 6.3e-52 208.0 204 58.3
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 1.1e-51 207.2 191 63.9
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.4e-51 206.1 198 58.1
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.1e-51 205.3 197 57.9
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 6.9e-51 204.5 203 55.2
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 9.0e-51 204.1 204 55.9
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 9.0e-51 204.1 199 55.8
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.5e-50 203.4 192 58.3
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.5e-50 203.4 199 56.3
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 7.6e-50 201.1 200 57.5
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 7.6e-50 201.1 202 55.0
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 2.2e-49 199.5 199 56.8
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 5.0e-49 198.4 197 56.3
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 8.5e-49 197.6 203 52.7
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.1e-48 197.2 202 57.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.5e-48 196.1 198 55.6
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.2e-48 195.7 196 57.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 5.5e-48 194.9 201 54.2
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 9.3e-48 194.1 197 54.3
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 9.3e-48 194.1 197 55.8
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.2e-47 193.7 196 55.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.2e-47 193.7 197 54.8
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.1e-47 193.0 198 53.5
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 2.1e-47 193.0 198 53.5
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 2.7e-47 192.6 197 55.8
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 2.7e-47 192.6 211 51.7
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.6e-47 192.2 197 56.3
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 3.6e-47 192.2 201 54.7
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 4.6e-47 191.8 199 54.8
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 6.1e-47 191.4 197 56.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 7.9e-47 191.0 209 51.7
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.8e-46 189.9 200 54.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.8e-46 189.9 169 59.2
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 2.3e-46 189.5 206 53.9
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.5e-45 186.8 206 51.9
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.9e-45 186.4 228 48.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 2.5e-45 186.0 198 54.5
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.3e-44 183.7 224 50.9
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.2e-44 183.0 206 51.5
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.2e-44 183.0 206 51.5
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.8e-44 182.6 152 63.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 3.7e-44 182.2 145 64.8
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 4.8e-44 181.8 207 50.7
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 8.2e-44 181.0 192 55.2
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-43 180.3 199 51.8
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 4.1e-43 178.7 194 52.1
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 5.3e-43 178.3 208 49.5
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 6.9e-43 177.9 210 48.6
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.2e-42 177.2 204 49.5
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.5e-42 176.8 228 46.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 4.5e-42 175.3 208 49.0
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 4.5e-42 175.3 208 49.0
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 5.9e-42 174.9 207 51.2
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 7.7e-42 174.5 213 49.8
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 7.7e-42 174.5 206 49.5
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 7.7e-42 174.5 143 61.5
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 1.3e-41 173.7 206 49.5
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 1.3e-41 173.7 206 49.5
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.3e-41 173.7 147 62.6
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 6.5e-41 171.4 189 51.3
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.1e-40 170.6 252 44.8
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.1e-40 170.6 212 46.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.1e-40 170.6 210 46.7
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.5e-40 169.5 161 59.0
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.5e-40 169.5 162 55.6
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 7.2e-40 167.9 218 47.2
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 7.2e-40 167.9 209 47.4
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.1e-39 166.4 190 50.0
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 2.7e-39 166.0 190 49.5
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 6.1e-39 164.9 207 48.3
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 7.9e-39 164.5 217 46.1
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.4e-38 163.7 208 45.7
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 3.9e-38 162.2 208 44.7
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 6.7e-38 161.4 208 44.7
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.3e-37 159.1 206 47.6
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.4e-37 158.7 226 43.8
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 5.7e-37 158.3 207 46.9
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 7.4e-37 157.9 139 60.4
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 4.8e-36 155.2 199 47.7
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.0e-34 149.8 199 46.7
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 5.9e-34 148.3 208 42.8
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 5.9e-34 148.3 191 46.6
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 5.5e-32 141.7 129 58.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.1e-29 134.0 212 42.9
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.3e-29 132.5 193 44.0
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.4e-27 127.1 187 47.1
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 9.1e-27 124.4 117 57.3
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.5e-25 118.2 124 52.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.0e-21 106.7 117 51.3
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 9.7e-21 104.4 76 69.7
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.4e-19 100.5 112 46.4
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.8e-17 92.4 87 55.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 2.8e-12 76.3 85 45.9
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 6.5e-09 65.1 156 29.5
CBR_g26029 Chara braunii HOM05D030917 ORTHO05D009223 1.2e-07 60.8 132 31.1


User provided reference genes

Program Settings