Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 8.9e-108 393.7 204 100.0
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 6.8e-92 340.9 204 87.3
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 3.4e-83 312.0 204 80.4
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 6.0e-80 301.2 202 80.2
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 7.8e-80 300.8 206 78.6
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 6.6e-79 297.7 202 78.7
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 4.3e-78 295.0 212 77.4
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 1.6e-77 293.1 202 78.2
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 3.6e-77 292.0 206 76.7
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 8.1e-77 290.8 202 77.2
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 1.8e-76 289.7 213 75.6
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 5.2e-76 288.1 221 72.4
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 8.9e-76 287.3 205 76.1
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 1.2e-75 287.0 207 77.3
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 3.4e-75 285.4 205 76.1
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 4.4e-75 285.0 206 73.8
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 1.7e-74 283.1 204 76.5
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.9e-74 282.3 209 74.6
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 8.4e-74 280.8 229 69.0
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 1.2e-72 276.9 207 75.8
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 1.2e-72 276.9 208 74.0
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 6.0e-72 274.6 204 75.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 6.0e-72 274.6 204 75.0
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 1.3e-71 273.5 212 75.9
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 7.3e-70 267.7 224 70.1
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 7.3e-70 267.7 219 68.9
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 9.6e-70 267.3 225 69.3
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.1e-68 263.8 202 72.8
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.8e-68 263.1 205 71.7
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 2.4e-68 262.7 204 72.1
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 4.0e-68 261.9 209 70.3
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 1.2e-67 260.4 219 68.0
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 1.5e-67 260.0 245 64.1
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 2.6e-67 259.2 209 72.2
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 3.4e-67 258.8 218 67.9
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 3.4e-67 258.8 218 69.7
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 5.8e-67 258.1 224 67.0
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 7.6e-67 257.7 212 68.4
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.9e-65 253.1 211 64.9
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 9.3e-65 250.8 214 68.7
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 2.7e-64 249.2 253 60.5
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.3e-63 246.9 270 57.8
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 1.3e-63 246.9 221 64.7
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.3e-63 246.9 236 61.4
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 1.7e-63 246.5 224 65.6
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 3.9e-63 245.4 209 67.0
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 3.9e-63 245.4 218 64.7
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 1.5e-62 243.4 214 67.8
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 7.4e-62 241.1 229 63.3
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 3.6e-61 238.8 206 68.0
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 3.6e-61 238.8 204 64.2
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 8.1e-61 237.7 219 66.2
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 3.1e-60 235.7 205 66.3
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 6.9e-60 234.6 164 79.9
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 6.9e-60 234.6 204 62.7
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 1.2e-59 233.8 211 63.5
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 1.5e-59 233.4 202 65.3
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.0e-59 233.0 226 62.4
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 2.6e-59 232.6 260 57.3
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 7.9e-56 221.1 206 61.2
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 5.1e-55 218.4 217 59.9
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 1.1e-54 217.2 214 60.3
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 2.5e-54 216.1 172 73.3
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 7.4e-54 214.5 204 58.3
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 2.1e-53 213.0 164 73.2
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 4.0e-52 208.8 166 72.3
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.0e-52 208.8 202 60.4
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 2.0e-51 206.5 208 58.7
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 1.1e-49 200.7 176 67.0
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.5e-49 199.5 162 69.8
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 5.5e-49 198.4 215 55.3
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 7.9e-48 194.5 172 64.0
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 1.8e-47 193.4 164 70.7
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 3.9e-47 192.2 185 63.8
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 8.7e-47 191.0 179 62.6
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 3.3e-46 189.1 204 55.4
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 1.3e-45 187.2 163 68.7
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 1.3e-45 187.2 272 48.2
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 3.7e-45 185.7 266 48.9
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 3.1e-44 182.6 206 55.8
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 1.5e-43 180.3 92 96.7
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 1.5e-43 180.3 114 80.7
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.0e-43 179.9 92 95.7
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 2.0e-43 179.9 92 95.7
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 2.6e-43 179.5 92 94.6
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 4.5e-43 178.7 92 94.6
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 7.6e-43 177.9 97 90.7
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.3e-42 177.2 92 95.7
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 5.0e-42 175.3 92 95.7
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 8.5e-42 174.5 92 94.6
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 1.9e-41 173.3 218 52.3
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 2.5e-41 172.9 166 60.8
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 7.2e-41 171.4 93 92.5
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 3.0e-39 166.0 92 92.4
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 3.0e-39 166.0 92 92.4
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 7.4e-38 161.4 221 46.6
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 8.2e-37 157.9 95 90.5
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 1.8e-36 156.8 202 49.0
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 3.1e-36 156.0 121 64.5
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 6.5e-34 148.3 181 55.8
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 1.1e-33 147.5 313 39.0
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 1.4e-33 147.1 239 46.4
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 1.2e-32 144.1 287 40.1
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 1.4e-31 140.6 208 45.2
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 2.2e-29 133.3 147 60.5
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 1.8e-28 130.2 166 47.6
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 2.6e-27 126.3 100 71.0
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 3.4e-27 125.9 107 68.2
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 4.5e-27 125.6 157 52.2
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 1.6e-24 117.1 63 88.9
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 2.7e-24 116.3 207 42.0
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 3.0e-23 112.8 162 50.0
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.0e-22 110.2 114 56.1
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 1.7e-21 107.1 280 36.8
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.1e-20 104.4 176 40.9
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 7.7e-19 98.2 134 50.7
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 1.0e-18 97.8 52 92.3
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 1.3e-18 97.4 120 49.2
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 3.2e-17 92.8 162 42.0
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 3.2e-17 92.8 162 42.0
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.2e-16 90.9 169 39.1
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 2.0e-14 83.6 110 51.8
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 2.6e-14 83.2 40 95.0
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 5.7e-14 82.0 51 80.4
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 9.7e-14 81.3 106 47.2
SGA_v2.0_scaffold25G10718 Striga asiatica HOM05D005752 ORTHO05D006959 4.5e-11 72.4 120 43.3
CsaV3_1G005260 Cucumis sativus L. HOM05D005752 ORTHO05D006959 1.0e-10 71.2 84 51.2
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 1.3e-10 70.9 41 85.4
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 2.1e-08 63.5 42 78.6
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 8.0e-08 61.6 40 72.5
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 2.3e-07 60.1 35 85.7
Cc00_g01560 Coffea canephora HOM05D005752 ORTHO05D006959 5.2e-07 58.9 85 49.4
Peaxi162Scf00171g00037 Petunia axillaris HOM05D005752 ORTHO05D006959 1.2e-06 57.8 83 39.8
vmacro17760 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 2.0e-06 57.0 87 42.5


User provided reference genes

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