Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 3.8e-81 304.7 142 100.0
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 4.5e-66 254.6 142 83.1
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 5.8e-66 254.2 137 83.2
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.2e-65 252.3 142 79.6
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 8.4e-65 250.4 142 79.6
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 5.5e-64 247.7 136 81.6
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.5e-64 247.7 135 81.5
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.5e-64 247.7 142 76.8
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 5.5e-64 247.7 134 82.8
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 5.5e-64 247.7 137 81.0
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 9.3e-64 246.9 135 81.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 9.3e-64 246.9 135 81.5
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 9.3e-64 246.9 135 81.5
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.6e-63 246.1 136 80.1
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-63 246.1 136 80.9
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-63 246.1 136 80.9
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-63 246.1 136 80.9
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.7e-63 245.4 136 83.1
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.7e-63 245.4 142 77.5
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 6.0e-63 244.2 135 80.7
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 6.0e-63 244.2 131 86.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 6.0e-63 244.2 136 80.1
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 7.9e-63 243.8 142 80.3
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 7.9e-63 243.8 135 82.2
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 7.9e-63 243.8 131 85.5
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.3e-62 242.3 134 80.6
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 2.3e-62 242.3 142 78.9
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.9e-62 241.5 134 81.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 8.7e-62 240.4 131 84.0
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.1e-61 240.0 135 79.3
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.5e-61 239.6 142 78.2
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.9e-61 239.2 131 83.2
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.3e-61 238.4 131 82.4
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.3e-61 238.0 140 75.7
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 4.3e-61 238.0 132 82.6
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.3e-60 236.5 130 81.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.6e-60 236.1 136 79.4
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.1e-60 235.7 131 81.7
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.1e-60 235.7 135 77.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.1e-60 235.7 132 81.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.7e-60 235.0 135 77.0
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 4.8e-60 234.6 131 80.2
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 8.2e-60 233.8 136 77.9
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.1e-59 233.4 135 77.0
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.1e-59 233.4 143 73.4
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.1e-59 233.4 136 77.2
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.1e-59 233.4 131 80.2
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.4e-59 233.0 132 78.8
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.8e-59 232.6 134 76.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.4e-59 232.3 131 80.9
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.4e-59 232.3 134 77.6
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.1e-59 231.9 132 78.8
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 3.1e-59 231.9 132 78.8
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 3.1e-59 231.9 140 74.3
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 4.1e-59 231.5 138 76.1
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 6.9e-59 230.7 140 73.6
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 9.0e-59 230.3 131 80.2
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.2e-58 229.9 132 78.0
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.2e-58 229.9 140 72.1
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 1.2e-58 229.9 140 72.9
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.2e-58 229.9 136 77.2
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.0e-58 229.2 132 78.0
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.0e-58 229.2 132 78.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 2.0e-58 229.2 134 76.1
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.6e-58 228.8 135 76.3
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 5.9e-58 227.6 131 78.6
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.9e-58 227.6 134 75.4
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.0e-57 226.9 131 79.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.3e-57 226.5 172 64.0
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.3e-57 226.5 132 75.0
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.3e-57 226.5 132 75.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.2e-57 225.7 130 78.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 6.5e-57 224.2 135 74.1
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.9e-56 222.6 138 72.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.2e-56 221.9 131 75.6
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.3e-56 220.3 140 71.4
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 9.3e-56 220.3 141 72.3
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.1e-55 219.2 132 75.8
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 3.6e-55 218.4 140 71.4
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.6e-55 218.0 139 71.2
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 6.1e-55 217.6 130 75.4
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.9e-55 217.2 131 74.0
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.9e-55 217.2 131 74.0
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.3e-54 216.5 131 71.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.3e-54 216.5 131 72.5
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 3.9e-54 214.9 131 73.3
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 3.9e-54 214.9 131 71.8
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 5.1e-54 214.5 136 69.9
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 6.7e-54 214.2 139 69.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 8.7e-54 213.8 131 74.0
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.1e-53 213.4 131 71.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.5e-53 213.0 131 73.3
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.9e-53 212.6 128 75.8
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 3.3e-53 211.8 139 67.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 4.3e-53 211.5 140 70.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.6e-52 209.5 132 69.7
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.2e-52 209.1 133 70.7
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.1e-51 206.8 131 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 3.1e-51 205.3 132 67.4
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.4e-50 201.8 117 76.9
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 8.5e-49 197.2 134 67.2
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.5e-48 195.7 132 66.7
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 5.5e-48 194.5 135 65.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 9.7e-45 183.7 142 60.6
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.8e-41 171.8 130 58.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.0e-38 163.7 134 59.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 2.0e-29 132.9 81 72.8
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.6e-29 132.5 76 75.0
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 3.4e-21 105.5 59 76.3
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.9e-14 80.9 47 74.5
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.4e-13 79.0 44 77.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.8e-11 73.2 54 63.0
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-06 57.0 44 59.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.3e-06 56.2 37 62.2


User provided reference genes

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