Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.7e-31 137.1 78 100.0
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.8e-30 134.0 78 91.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.6e-19 96.7 78 70.5
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.7e-17 90.9 78 64.1
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 9.8e-15 83.2 78 61.5
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 9.8e-15 83.2 78 61.5
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 8.3e-14 80.1 82 57.3
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 4.1e-13 77.8 77 57.1
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 9.2e-13 76.6 73 61.6
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.6e-12 75.9 79 58.2
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 3.5e-12 74.7 78 53.8
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 4.6e-12 74.3 73 54.8
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 7.8e-12 73.6 54 72.2
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 7.8e-12 73.6 79 53.2
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 3.9e-11 71.2 81 54.3
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 5.0e-11 70.9 83 51.8
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 5.0e-11 70.9 83 51.8
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 5.6e-10 67.4 78 57.7
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.2e-09 66.2 78 48.7
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.2e-09 66.2 78 48.7
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 3.6e-09 64.7 79 48.1
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.7e-09 64.3 79 50.6
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.7e-09 64.3 79 50.6
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 6.2e-09 63.9 78 51.3
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 8.0e-09 63.5 78 51.3
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 2.3e-08 62.0 70 54.3
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 3.1e-08 61.6 78 51.3
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 5.2e-08 60.8 44 68.2
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 6.8e-08 60.5 73 54.8
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 1.2e-07 59.7 62 53.2
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 2.0e-07 58.9 68 50.0
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.6e-07 58.5 60 58.3
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 3.4e-07 58.2 61 54.1
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.4e-07 58.2 60 56.7
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 9.8e-07 56.6 81 48.1
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 9.8e-07 56.6 78 50.0
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 1.7e-06 55.8 44 61.4
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.7e-06 55.8 57 56.1
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 2.2e-06 55.5 44 61.4
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.9e-06 55.1 69 46.4
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.9e-06 54.3 81 50.6
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 4.9e-06 54.3 69 46.4
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 6.4e-06 53.9 80 48.8
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 8.3e-06 53.5 78 50.0


User provided reference genes

Program Settings