Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 5.8e-69 264.2 145 100.0
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 4.3e-24 115.2 90 70.0
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 9.6e-24 114.0 141 48.2
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 1.8e-22 109.8 113 55.8
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 5.3e-22 108.2 101 62.4
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.2e-21 107.1 137 46.7
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 3.4e-21 105.5 146 50.0
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 5.8e-21 104.8 138 49.3
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 7.6e-21 104.4 141 48.9
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 1.7e-20 103.2 154 46.8
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 2.2e-20 102.8 90 63.3
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 2.9e-20 102.4 122 52.5
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 2.9e-20 102.4 119 52.9
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 4.9e-20 101.7 137 50.4
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 7.1e-19 97.8 96 59.4
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 2.7e-18 95.9 151 47.7
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 3.5e-18 95.5 144 48.6
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 7.9e-18 94.4 140 46.4
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 1.8e-17 93.2 140 46.4
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 1.8e-17 93.2 83 63.9
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.3e-17 92.8 123 48.8
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 3.0e-17 92.4 146 43.8
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 6.7e-17 91.3 117 49.6
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 8.7e-17 90.9 115 50.4
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.5e-16 90.1 142 46.5
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 1.5e-16 90.1 68 61.8
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 1.9e-16 89.7 136 42.6
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 1.9e-16 89.7 143 46.2
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 1.9e-16 89.7 143 46.9
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 4.3e-16 88.6 143 46.2
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 5.7e-16 88.2 115 48.7
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 9.7e-16 87.4 75 69.3
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 9.7e-16 87.4 118 51.7
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 9.7e-16 87.4 102 53.9
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 1.3e-15 87.0 150 42.7
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.6e-15 86.7 153 41.8
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 1.6e-15 86.7 118 48.3
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 2.2e-15 86.3 89 57.3
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 2.2e-15 86.3 102 49.0
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 2.2e-15 86.3 123 41.5
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 3.7e-15 85.5 143 44.8
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 3.7e-15 85.5 115 41.7
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 4.8e-15 85.1 118 48.3
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 6.3e-15 84.7 145 43.4
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 8.2e-15 84.3 116 46.6
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 1.1e-14 84.0 132 42.4
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 1.4e-14 83.6 151 39.1
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 1.4e-14 83.6 143 44.1
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.4e-14 83.6 118 44.9
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 1.4e-14 83.6 129 44.2
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 1.8e-14 83.2 64 62.5
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 1.8e-14 83.2 128 41.4
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 1.8e-14 83.2 116 45.7
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 2.4e-14 82.8 94 53.2
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 2.4e-14 82.8 84 53.6
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 2.4e-14 82.8 137 40.9
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 5.3e-14 81.6 105 47.6
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 9.0e-14 80.9 134 40.3
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 9.0e-14 80.9 134 40.3
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 9.0e-14 80.9 134 40.3
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 9.0e-14 80.9 90 52.2
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 1.5e-13 80.1 63 68.3
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.5e-13 80.1 114 43.9
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 1.5e-13 80.1 100 47.0
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 1.5e-13 80.1 132 41.7
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 2.0e-13 79.7 90 48.9
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 3.4e-13 79.0 142 40.8
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 3.4e-13 79.0 142 40.8
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 3.4e-13 79.0 88 55.7
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 3.4e-13 79.0 146 42.5
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 4.5e-13 78.6 134 40.3
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 4.5e-13 78.6 134 40.3
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 4.5e-13 78.6 91 50.5
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 4.5e-13 78.6 84 54.8
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 1.0e-12 77.4 141 42.6
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 1.3e-12 77.0 139 43.9
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 1.7e-12 76.6 100 45.0
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 2.2e-12 76.3 131 38.2
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 2.2e-12 76.3 144 38.2
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 3.8e-12 75.5 147 42.2
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 3.8e-12 75.5 139 44.6
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 5.0e-12 75.1 104 47.1
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 6.5e-12 74.7 123 40.7
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 8.5e-12 74.3 88 47.7
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 8.5e-12 74.3 113 44.2
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 8.5e-12 74.3 84 51.2
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 1.1e-11 73.9 134 41.8
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 7.2e-11 71.2 119 41.2
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 9.4e-11 70.9 95 49.5
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 7.9e-10 67.8 98 44.9
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 1.0e-09 67.4 101 46.5
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 1.4e-09 67.0 140 40.0
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.8e-09 66.6 78 50.0
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 8.8e-09 64.3 71 52.1
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.7e-08 61.6 48 68.8
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 9.7e-08 60.8 60 51.7
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 1.3e-07 60.5 46 58.7


User provided reference genes

Program Settings