Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 2005.7 1084 100.0
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1806.2 1092 87.0
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1706.0 1090 83.4
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1674.1 1084 80.2
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1659.0 1093 80.0
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1643.2 1085 81.2
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1637.5 1079 79.9
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1637.1 1089 80.2
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1636.3 1082 79.9
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1633.2 1083 81.3
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1625.5 1081 80.8
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1624.8 1079 79.5
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1624.8 1084 78.0
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1619.4 1096 80.0
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1618.2 1080 80.8
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1612.4 1059 80.1
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1610.1 1084 78.3
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1609.0 1104 76.5
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1606.7 1083 79.1
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1604.0 1086 78.0
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1598.2 1081 79.8
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1593.9 1058 80.0
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1591.6 1091 77.5
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1588.2 1089 77.8
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1586.6 1075 78.6
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1585.1 1054 80.5
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1584.3 1082 76.9
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1583.5 1081 79.6
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1582.8 1085 78.5
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1578.5 1082 77.4
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1575.8 1084 77.4
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1575.5 1082 77.7
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1570.8 1089 77.1
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1568.1 1083 76.5
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1568.1 1083 76.5
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1567.0 1060 78.6
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1563.5 1079 78.8
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1560.0 1091 77.5
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1558.5 1079 77.8
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1554.3 1079 77.9
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1552.0 1081 77.9
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1551.2 1110 75.2
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1550.0 1087 75.2
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1549.3 1084 77.8
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1548.5 1078 76.1
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1539.6 1084 75.5
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1538.5 974 79.4
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1535.8 1077 75.9
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1535.4 1041 78.5
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1527.3 1118 73.3
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1521.5 1103 75.2
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1520.8 1085 75.8
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1519.2 1086 75.5
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1517.7 1081 74.8
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1516.9 1077 75.0
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1511.1 1077 74.7
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1511.1 1113 74.5
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1509.6 1105 74.8
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1507.3 1110 73.8
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1507.3 868 85.9
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1505.3 1070 75.3
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1500.0 1187 69.4
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1498.0 869 84.7
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1497.6 869 84.6
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1496.1 869 84.6
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1484.5 1088 72.7
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1476.8 1078 73.0
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1466.1 1081 72.5
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1461.4 1079 73.0
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1455.7 1079 72.1
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1449.1 941 76.9
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1446.8 941 76.3
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1445.3 1053 73.7
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1444.5 1100 71.7
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1443.3 1073 71.0
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1442.6 942 76.1
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1440.6 1058 73.0
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1429.1 1116 71.1
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1427.9 869 82.0
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1423.3 1090 70.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1421.8 1095 69.0
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1420.6 975 73.9
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1419.8 942 75.3
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1419.8 942 75.3
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1418.7 942 75.2
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1415.6 1138 69.3
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1407.1 1096 69.7
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1395.6 1082 69.6
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1395.2 1082 71.6
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1387.5 1198 64.4
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1387.1 1058 72.4
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1376.3 1105 67.8
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1356.7 1253 61.3
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1345.5 1105 68.8
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1342.0 925 74.4
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1340.9 1055 67.9
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1331.6 899 75.8
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1302.7 1071 64.1
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1249.2 928 67.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1247.3 880 68.8
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 0.0e+00 1169.1 939 62.6
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 0.0e+00 1134.4 692 81.2
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 0.0e+00 1134.0 690 81.3
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 0.0e+00 1123.6 1054 61.4
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1077.8 546 98.5
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 6.7e-287 991.1 758 63.9
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.5e-283 979.9 690 73.2
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 5.7e-278 961.4 637 76.1
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 4.2e-257 892.1 623 72.6
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 6.3e-245 851.7 521 95.8
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.4e-206 722.6 570 64.9
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 3.2e-164 583.6 448 66.1
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 5.1e-154 549.7 318 84.3
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 5.9e-134 483.0 408 72.3
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.1e-131 474.6 450 58.7
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 4.5e-126 456.8 395 72.2
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 7.2e-124 449.5 368 58.7
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 7.5e-97 359.8 233 76.0
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 7.1e-95 353.2 324 59.0
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 7.8e-94 349.7 230 74.8
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 3.9e-93 347.4 1090 28.2
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.5e-92 345.5 276 64.5
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 1.1e-84 319.3 241 69.7
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 1.8e-82 312.0 1040 26.1
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.8e-74 285.4 387 44.2
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 2.0e-65 255.4 190 66.3
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 5.5e-63 247.3 134 87.3
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.2e-55 221.5 144 72.2
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.6e-46 192.6 217 50.2
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 2.3e-45 188.7 99 89.9
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.7e-44 184.1 107 84.1
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.8e-42 179.1 484 30.2
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 6.9e-42 177.2 243 47.7
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 9.0e-42 176.8 108 78.7
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 9.0e-42 176.8 225 43.6
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.5e-41 176.0 149 61.7
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 5.0e-40 171.0 103 74.8
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.6e-38 164.5 119 67.2
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 6.1e-38 164.1 121 67.8
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 6.7e-37 160.6 237 42.6
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 2.2e-35 155.6 89 83.1
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.1e-31 143.3 89 84.3
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 1.6e-30 139.4 150 54.0
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.1e-30 139.0 93 75.3
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 1.0e-29 136.7 150 53.3
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 2.8e-27 128.6 86 76.7
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.3e-27 127.5 108 62.0
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.3e-27 127.5 108 62.0
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.3e-27 127.5 108 62.0
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 3.1e-26 125.2 309 36.9
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.3e-24 119.8 87 75.9
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 9.4e-23 113.6 79 65.8
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 3.0e-21 108.6 61 82.0
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.4e-20 104.8 80 68.8
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 5.7e-20 104.4 97 64.9
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 9.7e-20 103.6 67 74.6
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.7e-19 102.8 61 72.1
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.8e-19 101.3 134 44.8
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 8.2e-19 100.5 59 79.7
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.6e-17 96.3 79 59.5
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.5e-17 95.1 190 40.5
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 1.1e-15 90.1 51 82.4
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 5.5e-15 87.8 47 93.6
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 8.8e-13 80.5 55 72.7
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 6.3e-11 74.3 79 51.9
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 2.4e-10 72.4 63 57.1
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 1.6e-09 69.7 79 49.4
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 1.6e-09 69.7 66 54.5
PRCOL_00001933 Prasinoderma coloniale HOM05D026299 ORTHO05D028720 1.3e-08 66.6 156 28.8
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.8e-08 65.1 47 63.8
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 5.0e-08 64.7 236 22.9
SEGI_17061 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.5e-07 63.2 45 66.7
MCO11G359 Micromonas commoda HOM05D026299 ORTHO05D028720 1.6e-06 59.7 227 22.0
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 1.6e-06 59.7 271 24.7
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.1e-06 59.3 38 73.7
A07p06220 Brassica napus HOM05D003881 ORTHO05D004343 3.6e-06 58.5 72 43.1
SEGI_10645 Sequoiadendron giganteum HOM05D000563 ORTHO05D006573 4.7e-06 58.2 42 64.3
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 6.1e-06 57.8 282 22.7
Lj1g0010496 Lotus japonicus HOM05D005978 ORTHO05D007472 8.0e-06 57.4 329 24.0
PGSC0003DMG400019565 Solanum tuberosum HOM05D003881 ORTHO05D004343 8.0e-06 57.4 88 46.6


User provided reference genes

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