Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G1030 Trochodendron aralioides HOM05D002450 ORTHO05D002953 4.4e-121 438.0 220 100.0
TAR381G1265 Trochodendron aralioides HOM05D002450 ORTHO05D002953 1.2e-25 120.9 242 41.3
TAR625G0542 Trochodendron aralioides HOM05D002450 ORTHO05D002953 2.7e-25 119.8 234 41.0
Nn5g30523 Nelumbo nucifera HOM05D002450 ORTHO05D002953 4.0e-21 105.9 240 36.2
Dinv39244 Davidia involucrata HOM05D002450 ORTHO05D002953 6.4e-19 98.6 224 36.6
Dinv44973 Davidia involucrata HOM05D002450 ORTHO05D002953 7.0e-18 95.1 228 37.3
Nn1g04614 Nelumbo nucifera HOM05D002450 ORTHO05D002953 2.0e-17 93.6 235 34.9
MBI15_g43330_MAGBIO Magnolia biondii HOM05D002450 ORTHO05D002953 1.9e-15 87.0 212 35.4
Lj4C69T6 Lonicera japonica HOM05D002450 ORTHO05D002953 8.9e-13 78.2 223 33.2
Cfa003416 Carpinus fangiana HOM05D002450 ORTHO05D002953 1.5e-12 77.4 226 32.3
MD06G1005900 Malus domestica HOM05D002450 ORTHO05D002953 7.5e-12 75.1 228 33.3
Haze_26082 Corylus avellana HOM05D002450 ORTHO05D002953 2.9e-11 73.2 226 31.4
Ciclev10000177m.g Citrus clementina HOM05D002450 ORTHO05D002953 6.4e-11 72.0 221 29.9
Actinidia10186 Actinidia chinensis HOM05D002450 ORTHO05D002953 1.4e-10 70.9 230 31.7
RcHm_v2.0_Chr7g0216291 Rosa chinensis HOM05D002450 ORTHO05D002953 1.4e-10 70.9 228 32.9
QL12p037610 Quercus lobata HOM05D002450 ORTHO05D002953 5.4e-10 68.9 237 30.4
Migut.N02766 Erythranthe guttata HOM05D002450 ORTHO05D002953 7.0e-10 68.6 116 44.0
Oeu012055.1 Olea europaea HOM05D002450 ORTHO05D002953 9.2e-10 68.2 139 38.8
Prupe.6G138300 Prunus persica HOM05D002450 ORTHO05D002953 1.2e-09 67.8 213 33.3
Actinidia22682 Actinidia chinensis HOM05D002450 ORTHO05D002953 2.0e-09 67.0 230 31.3
Prupe.5G007400 Prunus persica HOM05D002450 ORTHO05D002953 2.0e-09 67.0 230 32.6
Haze_25520 Corylus avellana HOM05D002450 ORTHO05D002953 3.5e-09 66.2 224 29.9
Cpa.g.sc21.108 Carica papaya HOM05D002450 ORTHO05D002953 6.0e-09 65.5 84 50.0
Thecc.08G091300 Theobroma cacao HOM05D002450 ORTHO05D002953 7.8e-09 65.1 237 31.6
FAN13G2461 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.5e-07 60.8 216 31.5
CiPaw.07G177000 Carya illinoinensis HOM05D002450 ORTHO05D002953 1.9e-07 60.5 223 28.3
FAN04G2208 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.9e-07 60.5 217 31.3
Cpa.g.sc123.17 Carica papaya HOM05D002450 ORTHO05D002953 2.5e-07 60.1 128 36.7
FAN08G0311 Fragaria x ananassa HOM05D002450 ORTHO05D002953 2.5e-07 60.1 217 31.3
Aqoxy1G00817 Aquilegia oxysepala HOM05D002450 ORTHO05D002953 3.3e-07 59.7 228 28.5
Duzib093G1995 Durio zibethinus HOM05D002450 ORTHO05D002953 3.3e-07 59.7 138 37.7
FvH4_5g25820 Fragaria vesca HOM05D002450 ORTHO05D002953 4.3e-07 59.3 213 31.9
FAN18G3361 Fragaria x ananassa HOM05D002450 ORTHO05D002953 4.3e-07 59.3 213 31.9
Gohir.D01G108500 Gossypium hirsutum HOM05D002450 ORTHO05D002953 4.3e-07 59.3 99 46.5
Gorai.002G132700 Gossypium raimondii HOM05D002450 ORTHO05D002953 4.3e-07 59.3 99 46.5
Gorai.009G277000 Gossypium raimondii HOM05D002450 ORTHO05D002953 4.3e-07 59.3 235 29.4
PSO675G5640 Papaver somniferum HOM05D002450 ORTHO05D002953 5.6e-07 58.9 232 28.0
Atru.chr13.809 Acer truncatum HOM05D002450 ORTHO05D002953 1.6e-06 57.4 196 33.2
Eucgr.C02521 Eucalyptus grandis HOM05D002450 ORTHO05D002953 1.6e-06 57.4 144 36.1
Gohir.D05G265200 Gossypium hirsutum HOM05D002450 ORTHO05D002953 1.6e-06 57.4 235 29.4
Gohir.A05G263000 Gossypium hirsutum HOM05D002450 ORTHO05D002953 2.8e-06 56.6 236 29.7
GSVIVG01009365001 Vitis vinifera HOM05D002450 ORTHO05D002953 4.7e-06 55.8 158 31.0


User provided reference genes

Program Settings