Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 2.9e-204 714.9 337 100.0
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.1e-131 473.8 347 68.0
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 6.1e-130 468.0 366 64.2
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.4e-129 466.8 360 66.4
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.3e-124 450.3 357 65.8
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 4.2e-123 445.3 289 76.1
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 7.5e-120 434.5 316 68.0
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 1.4e-118 430.3 309 70.9
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 7.0e-118 427.9 358 62.6
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 7.0e-118 427.9 328 67.1
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 9.1e-118 427.6 348 63.8
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.5e-117 425.2 359 62.1
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.9e-117 424.9 361 61.8
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.7e-117 424.5 361 61.5
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 2.3e-116 422.9 351 62.7
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 5.6e-115 418.3 360 61.1
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 4.7e-114 415.2 276 72.8
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 4.7e-114 415.2 275 72.4
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.3e-113 412.9 287 70.7
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 3.0e-113 412.5 229 83.0
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 3.0e-113 412.5 332 64.8
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 5.2e-113 411.8 218 86.7
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 6.8e-113 411.4 283 71.0
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 6.8e-113 411.4 217 86.6
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 6.8e-113 411.4 347 60.8
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.0e-112 409.8 356 60.4
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.7e-112 408.3 321 64.8
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 2.9e-111 406.0 328 64.0
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 2.9e-111 406.0 364 57.1
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 6.4e-111 404.8 319 63.3
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 8.3e-111 404.4 322 64.6
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.8e-110 403.3 284 70.4
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 7.0e-110 401.4 289 67.1
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.6e-109 400.2 213 87.8
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 5.9e-109 398.3 213 86.4
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 1.7e-108 396.7 229 79.9
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.5e-107 393.7 265 72.1
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.9e-107 393.3 265 71.7
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 3.3e-107 392.5 298 62.8
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 7.3e-107 391.3 226 80.1
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 7.3e-107 391.3 306 65.7
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 9.5e-107 391.0 310 66.1
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.2e-106 390.6 320 61.6
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.2e-106 390.6 313 63.3
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.2e-106 390.6 313 63.9
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.2e-106 390.6 289 66.1
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.1e-106 389.8 313 63.3
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 3.6e-106 389.0 217 83.4
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 6.2e-106 388.3 285 70.2
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 8.0e-106 387.9 305 63.6
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.4e-105 387.1 226 81.4
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.4e-105 387.1 216 84.3
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 1.4e-105 387.1 286 64.3
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 5.2e-105 385.2 286 64.0
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 6.8e-105 384.8 206 84.5
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 2.6e-104 382.9 291 66.3
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 4.4e-104 382.1 226 80.1
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 4.4e-104 382.1 280 66.4
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 4.4e-104 382.1 284 68.0
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.9e-103 379.4 311 60.5
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 2.9e-103 379.4 206 82.5
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 3.7e-103 379.0 230 76.5
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 4.9e-103 378.6 288 67.0
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.9e-103 378.6 230 77.0
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 6.4e-103 378.3 284 64.8
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.4e-102 377.1 263 69.6
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 3.2e-102 375.9 309 64.1
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 4.1e-102 375.6 217 80.2
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 4.1e-102 375.6 241 73.9
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 7.0e-102 374.8 301 61.8
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.2e-102 374.4 296 61.5
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.2e-102 374.4 236 77.5
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 1.2e-101 374.0 299 64.2
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.0e-101 373.2 220 80.5
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.0e-101 373.2 295 63.4
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 3.5e-101 372.5 216 79.2
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.6e-101 372.1 281 64.1
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 4.6e-101 372.1 288 63.5
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 4.6e-101 372.1 230 75.7
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 6.0e-101 371.7 287 63.8
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 6.0e-101 371.7 287 63.8
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 6.0e-101 371.7 294 59.5
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 7.8e-101 371.3 285 63.2
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 7.8e-101 371.3 257 69.3
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 1.0e-100 370.9 286 62.9
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.3e-100 370.5 315 61.0
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.7e-100 370.2 219 79.5
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 2.3e-100 369.8 239 71.5
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 2.3e-100 369.8 239 71.5
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 3.0e-100 369.4 241 72.2
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 3.0e-100 369.4 216 79.2
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 5.0e-100 368.6 254 68.5
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.5e-99 367.1 316 60.8
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.5e-99 367.1 280 65.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.9e-99 366.7 233 73.8
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.9e-99 366.7 228 77.2
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.3e-99 365.9 315 59.7
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.3e-99 365.9 284 63.7
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.2e-98 364.0 315 60.6
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 2.8e-98 362.8 324 59.6
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 3.6e-98 362.5 295 62.0
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.6e-98 362.5 216 79.6
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 6.2e-98 361.7 219 77.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 1.1e-97 360.9 213 79.3
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.4e-97 360.5 291 59.8
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.8e-97 360.1 216 78.2
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 2.3e-97 359.8 275 65.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 2.3e-97 359.8 310 57.1
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 4.4e-96 355.5 206 76.2
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.9e-95 352.8 322 56.8
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 3.7e-95 352.4 210 74.3
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 1.4e-94 350.5 281 63.3
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.9e-94 350.1 308 58.1
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 2.7e-93 346.3 195 81.0
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 1.3e-92 344.0 258 65.5
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 6.6e-92 341.7 264 62.5
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 8.9e-89 331.3 219 70.3
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 1.7e-84 317.0 225 73.3
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 8.9e-81 304.7 223 61.4
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 2.3e-76 290.0 277 58.1
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 2.5e-75 286.6 162 76.5
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.5e-75 286.6 162 79.0
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 5.6e-75 285.4 201 60.7
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.3e-74 284.3 201 63.7
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.8e-71 272.7 160 76.2
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.2e-70 269.6 151 80.8
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 9.3e-70 268.1 146 86.3
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 6.9e-65 251.9 145 78.6
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 6.0e-61 238.8 201 56.2
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 7.6e-56 221.9 152 67.8
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 2.2e-55 220.3 122 79.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.1e-46 191.4 156 60.3
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 3.2e-46 189.9 229 43.2
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.7e-31 141.0 117 55.6
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 2.0e-24 117.5 191 44.0
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 5.9e-24 115.9 83 56.6
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 1.0e-23 115.2 114 55.3
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.1e-19 101.7 135 46.7
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.0e-19 100.9 80 63.8
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.4e-17 94.7 156 40.4
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 5.3e-17 92.8 62 71.0
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 3.8e-15 86.7 57 71.9
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.8e-12 77.8 65 60.0
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 1.2e-11 75.1 37 81.1
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 1.1e-06 58.5 37 70.3
SEGI_31523 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.2e-06 56.6 57 49.1


User provided reference genes

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