Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0975 Trochodendron aralioides HOM05D004788 ORTHO05D006465 4.8e-31 137.1 66 100.0
TAR626G1809 Trochodendron aralioides HOM05D004788 ORTHO05D006465 9.5e-19 96.3 66 75.8
Atru.chr12.739 Acer truncatum HOM05D004788 ORTHO05D006465 1.2e-18 95.9 66 74.2
Phvul.007G094100 Phaseolus vulgaris HOM05D004788 ORTHO05D006465 2.8e-18 94.7 66 71.2
Manes.07G101300 Manihot esculenta HOM05D004788 ORTHO05D006465 3.6e-18 94.4 66 71.2
Ca_10574_v3 Cicer arietinum L. HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 72.7
Ca_29597_v3 Cicer arietinum L. HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 72.7
Medtr1g095360 Medicago truncatula HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 72.7
Nn8g40780 Nelumbo nucifera HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 72.7
QL08p056120 Quercus lobata HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 71.2
VMungo0720G1279 Vigna mungo HOM05D004788 ORTHO05D006465 4.7e-18 94.0 66 69.7
Glyma.20G179400 Glycine max HOM05D004788 ORTHO05D006465 6.1e-18 93.6 66 71.2
TPR.G1941 Trifolium pratense HOM05D004788 ORTHO05D006465 6.1e-18 93.6 66 71.2
Duzib128G1556 Durio zibethinus HOM05D004788 ORTHO05D006465 8.0e-18 93.2 66 72.7
Glyma.10G211600 Glycine max HOM05D004788 ORTHO05D006465 8.0e-18 93.2 66 69.7
Haze_05226 Corylus avellana HOM05D004788 ORTHO05D006465 1.0e-17 92.8 66 69.7
Haze_16900 Corylus avellana HOM05D004788 ORTHO05D006465 1.0e-17 92.8 66 69.7
Eucgr.G02823 Eucalyptus grandis HOM05D004788 ORTHO05D006465 1.0e-17 92.8 66 71.2
Ciclev10030655m.g Citrus clementina HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 71.2
COL.COLO4_23692 Corchorus olitorius HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 71.2
Lj5g0009066 Lotus japonicus HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 71.2
MBI13_g34045_MAGBIO Magnolia biondii HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 72.7
Psat6g184480 Pisum sativum HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 69.7
TWI38G1549 Tripterygium wilfordii HOM05D004788 ORTHO05D006465 1.4e-17 92.4 66 71.2
arahy.Tifrunner.gnm1.ann1.CYD8BJ Arachis hypogaea HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 69.7
arahy.Tifrunner.gnm1.ann1.L4RTFU Arachis hypogaea HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 69.7
arahy.Tifrunner.gnm1.ann1.M3N3P9 Arachis hypogaea HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 69.7
CSS0002233 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 71.2
CSS0028648 Camellia sinensis var. sinensis HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 71.2
Dinv11781 Davidia involucrata HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 69.7
FvH4_7g19690 Fragaria vesca HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 72.7
PGR142G2437 Punica granatum HOM05D004788 ORTHO05D006465 1.8e-17 92.0 66 71.2
FAN01G2387 Fragaria x ananassa HOM05D004788 ORTHO05D006465 3.0e-17 91.3 66 71.2
FAN10G0780 Fragaria x ananassa HOM05D004788 ORTHO05D006465 3.0e-17 91.3 66 71.2
FAN10G0980 Fragaria x ananassa HOM05D004788 ORTHO05D006465 3.0e-17 91.3 66 71.2
EL10Ac5g12961 Beta vulgaris HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 71.2
Gohir.A10G206600 Gossypium hirsutum HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 69.7
Gohir.D10G214700 Gossypium hirsutum HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 69.7
Gorai.011G240300 Gossypium raimondii HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 69.7
Potri.010G221500 Populus trichocarpa HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 69.7
RcHm_v2.0_Chr1g0363521 Rosa chinensis HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 71.2
Thecc.10G072500 Theobroma cacao HOM05D004788 ORTHO05D006465 4.0e-17 90.9 66 69.7
Actinidia16628 Actinidia chinensis HOM05D004788 ORTHO05D006465 5.2e-17 90.5 66 69.7
AL4G23410 Arabidopsis lyrata HOM05D004788 ORTHO05D006465 5.2e-17 90.5 66 68.2
BcaC02g11019 Brassica carinata HOM05D004788 ORTHO05D006465 5.2e-17 90.5 66 68.2
C04p22120 Brassica napus HOM05D004788 ORTHO05D006465 5.2e-17 90.5 66 68.2
BolC4t23734H Brassica oleracea HOM05D004788 ORTHO05D006465 5.2e-17 90.5 66 68.2
Prupe.2G214500 Prunus persica HOM05D004788 ORTHO05D006465 6.8e-17 90.1 66 69.7
Ah.12g052940 Amaranthus hybridus HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 71.2
CARHR122030 Cardamine hirsuta HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 66.7
CiPaw.02G174400 Carya illinoinensis HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 69.7
DCAR_015314 Daucus carota HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 68.2
FAN03G1313 Fragaria x ananassa HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 71.2
PSO063G3786 Papaver somniferum HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 66.7
PSO170G4427 Papaver somniferum HOM05D004788 ORTHO05D006465 8.9e-17 89.7 66 66.7
BcaB02g10208 Brassica carinata HOM05D004788 ORTHO05D006465 1.2e-16 89.4 66 66.7
A07p19340 Brassica napus HOM05D004788 ORTHO05D006465 1.2e-16 89.4 66 66.7
Lalb_Chr02g0142131 Lupinus albus HOM05D004788 ORTHO05D006465 1.2e-16 89.4 66 68.2
Sabra10G0171400 Salix brachista HOM05D004788 ORTHO05D006465 1.2e-16 89.4 66 66.7
Aqoxy7G02809 Aquilegia oxysepala HOM05D004788 ORTHO05D006465 1.5e-16 89.0 66 65.2
Thhalv10016200m.g Eutrema salsugineum HOM05D004788 ORTHO05D006465 1.5e-16 89.0 66 66.7
Lj1C915G0 Lonicera japonica HOM05D004788 ORTHO05D006465 1.5e-16 89.0 66 68.2
Sp4g11690 Schrenkiella parvula HOM05D004788 ORTHO05D006465 1.5e-16 89.0 66 66.7
CANSAT25G2619 Cannabis sativa HOM05D004788 ORTHO05D006465 2.0e-16 88.6 66 68.2
Cc09_g02020 Coffea canephora HOM05D004788 ORTHO05D006465 2.0e-16 88.6 66 66.7
Rhsim09G0110900 Rhododendron simsii HOM05D004788 ORTHO05D006465 2.0e-16 88.6 66 68.2
AT2G28880 Arabidopsis thaliana HOM05D004788 ORTHO05D006465 2.6e-16 88.2 66 65.2
ECA232G0614 Erigeron canadensis HOM05D004788 ORTHO05D006465 2.6e-16 88.2 66 66.7
Hund11372 Selenicereus undatus HOM05D004788 ORTHO05D006465 2.6e-16 88.2 66 69.7
Aa31LG5G7350 Aethionema arabicum HOM05D004788 ORTHO05D006465 4.4e-16 87.4 66 65.2
AUR62007018 Chenopodium quinoa HOM05D004788 ORTHO05D006465 4.4e-16 87.4 66 69.7
AUR62019882 Chenopodium quinoa HOM05D004788 ORTHO05D006465 4.4e-16 87.4 66 69.7
CAN.G4.2 Capsicum annuum HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 65.2
MD01G1109300 Malus domestica HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 69.7
MD07G1175300 Malus domestica HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 68.2
Nitab4.5_0004657g0010 Nicotiana tabacum HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 65.2
Nitab4.5_0013243g0010 Nicotiana tabacum HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 65.2
unitig_60.g25702 Utricularia gibba HOM05D004788 ORTHO05D006465 5.7e-16 87.0 66 66.7
CDE05G0857 Ceratophyllum demersum HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 66.7
Lsat_1_v5_gn_4_181581 Lactuca sativa HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 63.6
Oeu043946.1 Olea europaea HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 65.2
Oeu043947.4 Olea europaea HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 65.2
Sc20g0001900 Simmondsia chinensis HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 65.2
GSVIVG01016291001 Vitis vinifera HOM05D004788 ORTHO05D006465 7.5e-16 86.7 66 66.7
HanXRQChr08g0208591 Helianthus annuus HOM05D004788 ORTHO05D006465 9.8e-16 86.3 66 63.6
Solyc04g049360.3 Solanum lycopersicum HOM05D004788 ORTHO05D006465 9.8e-16 86.3 66 65.2
Sopen04g019320 Solanum pennellii HOM05D004788 ORTHO05D006465 9.8e-16 86.3 66 65.2
PGSC0003DMG400009777 Solanum tuberosum HOM05D004788 ORTHO05D006465 9.8e-16 86.3 66 65.2
Carub.0004s0987 Capsella rubella HOM05D004788 ORTHO05D006465 2.2e-15 85.1 66 63.6
HPP92_010286 Vanilla planifolia HOM05D004788 ORTHO05D006465 2.2e-15 85.1 66 68.2
TWI15G0420 Tripterygium wilfordii HOM05D004788 ORTHO05D006465 2.8e-15 84.7 66 66.7
SalBow5G2521 Salvia bowleyana HOM05D004788 ORTHO05D006465 3.7e-15 84.3 66 65.2
MELO3C012434.2 Cucumis melo HOM05D004788 ORTHO05D006465 4.9e-15 84.0 66 63.6
Os06g0699700 Oryza sativa ssp. japonica HOM05D004788 ORTHO05D006465 6.3e-15 83.6 66 65.2
Sed0008505 Sechium edule HOM05D004788 ORTHO05D006465 6.3e-15 83.6 66 63.6
SEGI_34163 Sequoiadendron giganteum HOM05D004788 ORTHO05D006465 6.3e-15 83.6 66 60.6
BcaB06g28261 Brassica carinata HOM05D004788 ORTHO05D006465 8.3e-15 83.2 66 62.1
GSVIVG01016290001 Vitis vinifera HOM05D004788 ORTHO05D006465 8.3e-15 83.2 66 65.2
BcaC02g08128 Brassica carinata HOM05D004788 ORTHO05D006465 1.1e-14 82.8 66 65.2
C04p58070 Brassica napus HOM05D004788 ORTHO05D006465 1.1e-14 82.8 66 65.2
BolC4t27333H Brassica oleracea HOM05D004788 ORTHO05D006465 1.1e-14 82.8 66 65.2
ClCG05G020950 Citrullus lanatus HOM05D004788 ORTHO05D006465 1.1e-14 82.8 66 60.6
SHI08829 Sapria himalayana HOM05D004788 ORTHO05D006465 1.1e-14 82.8 65 64.6
CDE05G0793 Ceratophyllum demersum HOM05D004788 ORTHO05D006465 1.8e-14 82.0 66 63.6
CsaV3_5G036360 Cucumis sativus L. HOM05D004788 ORTHO05D006465 1.8e-14 82.0 66 60.6
Peaxi162Scf00747g00211 Petunia axillaris HOM05D004788 ORTHO05D006465 1.8e-14 82.0 66 60.6
A04p21930 Brassica napus HOM05D004788 ORTHO05D006465 2.4e-14 81.6 66 63.6
SGA_v2.0_scaffold341G49365 Striga asiatica HOM05D004788 ORTHO05D006465 2.4e-14 81.6 66 63.6
ATR0626G067 Amborella trichopoda HOM05D004788 ORTHO05D006465 3.1e-14 81.3 66 63.6
Zm00001eb272970 Zea mays HOM05D004788 ORTHO05D006465 3.1e-14 81.3 66 60.6
BraA04t17760Z Brassica rapa HOM05D004788 ORTHO05D006465 1.2e-13 79.3 64 64.1
Migut.F01772 Erythranthe guttata HOM05D004788 ORTHO05D006465 1.2e-13 79.3 66 60.6
Mapoly0009s0140 Marchantia polymorpha HOM05D004788 ORTHO05D006465 7.8e-13 76.6 66 57.6
AagrBONN_evm.TU.Sc2ySwM_368.19 Anthoceros agrestis HOM05D004788 ORTHO05D006465 2.3e-12 75.1 66 57.6
AagrBONN_evm.TU.Sc2ySwM_368.2427 Anthoceros agrestis HOM05D004788 ORTHO05D006465 2.3e-12 75.1 66 57.6
SMO356G0457 Selaginella moellendorffii HOM05D004788 ORTHO05D006465 8.6e-12 73.2 66 54.5
CBR_g2786 Chara braunii HOM05D004788 ORTHO05D006465 3.6e-10 67.8 61 54.1
Pp3c26_2070 Physcomitrium patens HOM05D004788 ORTHO05D006465 8.0e-10 66.6 66 54.5


User provided reference genes

Program Settings