Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0886 Trochodendron aralioides HOM05D000651 ORTHO05D003435 3.8e-35 151.0 78 100.0
TAR374G0094 Trochodendron aralioides HOM05D000651 ORTHO05D003435 1.6e-25 119.0 77 80.5
Nn4g24169 Nelumbo nucifera HOM05D000651 ORTHO05D003435 1.4e-24 115.9 77 75.3
TAR622G0208 Trochodendron aralioides HOM05D000651 ORTHO05D003435 6.8e-24 113.6 77 77.9
Aqoxy3G02802 Aquilegia oxysepala HOM05D000651 ORTHO05D003435 1.5e-18 95.9 77 66.2
MBI10_g02385_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 1.9e-18 95.5 76 65.8
PSO017G0211 Papaver somniferum HOM05D000651 ORTHO05D003435 1.9e-18 95.5 77 64.9
Cfa008200 Carpinus fangiana HOM05D000651 ORTHO05D003435 2.5e-18 95.1 77 64.9
CiPaw.05G189700 Carya illinoinensis HOM05D000651 ORTHO05D003435 2.5e-18 95.1 77 64.9
MBI10_g02386_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 3.3e-18 94.7 76 64.5
EL10Ac6g14044 Beta vulgaris HOM05D000651 ORTHO05D003435 4.2e-18 94.4 77 66.2
CSS0009730 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003435 7.2e-18 93.6 77 63.6
CSS0024016 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003435 7.2e-18 93.6 77 63.6
Nn3g18232 Nelumbo nucifera HOM05D000651 ORTHO05D003435 1.2e-17 92.8 65 72.3
Cfa015010 Carpinus fangiana HOM05D000651 ORTHO05D003435 1.6e-17 92.4 77 63.6
CiPaw.06G050900 Carya illinoinensis HOM05D000651 ORTHO05D003435 2.8e-17 91.7 77 63.6
CDE02G3974 Ceratophyllum demersum HOM05D000651 ORTHO05D003435 3.6e-17 91.3 77 61.0
Thecc.02G282200 Theobroma cacao HOM05D000651 ORTHO05D003435 4.7e-17 90.9 77 62.3
vmacro00416 Vaccinium macrocarpon HOM05D000651 ORTHO05D003435 4.7e-17 90.9 77 62.3
Actinidia08056 Actinidia chinensis HOM05D000651 ORTHO05D003435 6.1e-17 90.5 77 61.0
CiPaw.06G050800 Carya illinoinensis HOM05D000651 ORTHO05D003435 1.0e-16 89.7 77 63.6
COL.COLO4_20490 Corchorus olitorius HOM05D000651 ORTHO05D003435 1.0e-16 89.7 77 62.3
Atru.chr11.927 Acer truncatum HOM05D000651 ORTHO05D003435 1.4e-16 89.4 77 61.0
Cfa008616 Carpinus fangiana HOM05D000651 ORTHO05D003435 1.4e-16 89.4 78 65.4
Peaxi162Scf00120g00210 Petunia axillaris HOM05D000651 ORTHO05D003435 1.4e-16 89.4 77 59.7
AUR62014178 Chenopodium quinoa HOM05D000651 ORTHO05D003435 1.8e-16 89.0 77 61.0
Rhsim09G0066700 Rhododendron simsii HOM05D000651 ORTHO05D003435 2.3e-16 88.6 77 62.3
Sc04g0005380 Simmondsia chinensis HOM05D000651 ORTHO05D003435 2.3e-16 88.6 76 60.5
Solyc09g007640.4 Solanum lycopersicum HOM05D000651 ORTHO05D003435 2.3e-16 88.6 77 58.4
ATR1153G035 Amborella trichopoda HOM05D000651 ORTHO05D003435 3.0e-16 88.2 76 59.2
AUR62002757 Chenopodium quinoa HOM05D000651 ORTHO05D003435 3.0e-16 88.2 77 61.0
Duzib251G0557 Durio zibethinus HOM05D000651 ORTHO05D003435 3.0e-16 88.2 77 61.0
Oeu037314.4 Olea europaea HOM05D002812 ORTHO05D003435 3.0e-16 88.2 77 57.1
Sopen09g002510 Solanum pennellii HOM05D000651 ORTHO05D003435 3.0e-16 88.2 77 58.4
QL03p035375 Quercus lobata HOM05D000651 ORTHO05D003435 4.0e-16 87.8 77 61.0
Haze_10996 Corylus avellana HOM05D000651 ORTHO05D003435 6.8e-16 87.0 78 65.4
Potri.005G060100 Populus trichocarpa HOM05D000651 ORTHO05D003435 6.8e-16 87.0 77 59.7
QL03p035397 Quercus lobata HOM05D000651 ORTHO05D003435 6.8e-16 87.0 77 59.7
RcHm_v2.0_Chr6g0287751 Rosa chinensis HOM05D000651 ORTHO05D003435 6.8e-16 87.0 78 61.5
Dinv07651 Davidia involucrata HOM05D000651 ORTHO05D003435 8.9e-16 86.7 78 61.5
Lsat_1_v5_gn_3_55021 Lactuca sativa HOM05D000651 ORTHO05D003435 8.9e-16 86.7 77 57.1
QL01p001612 Quercus lobata HOM05D000651 ORTHO05D003435 8.9e-16 86.7 77 62.3
PGSC0003DMG400001753 Solanum tuberosum HOM05D000651 ORTHO05D003435 8.9e-16 86.7 77 57.1
Potri.008G129800 Populus trichocarpa HOM05D000651 ORTHO05D003435 1.2e-15 86.3 77 61.0
Aqoxy3G02799 Aquilegia oxysepala HOM05D000651 ORTHO05D003435 1.5e-15 85.9 77 59.7
Nitab4.5_0005150g0050 Nicotiana tabacum HOM05D005011 ORTHO05D006443 1.5e-15 85.9 77 58.4
Gohir.A03G120900 Gossypium hirsutum HOM05D000651 ORTHO05D003435 2.0e-15 85.5 77 61.0
Gohir.D02G144200 Gossypium hirsutum HOM05D000651 ORTHO05D003435 2.0e-15 85.5 77 61.0
Gorai.005G161500 Gossypium raimondii HOM05D000651 ORTHO05D003435 2.0e-15 85.5 77 61.0
RcHm_v2.0_Chr6g0287771 Rosa chinensis HOM05D000651 ORTHO05D003435 2.0e-15 85.5 78 60.3
Thecc.02G287700 Theobroma cacao HOM05D000651 ORTHO05D003435 2.0e-15 85.5 77 57.1
Gohir.A04G142000 Gossypium hirsutum HOM05D000651 ORTHO05D003435 2.6e-15 85.1 77 55.8
CiPaw.05G250300 Carya illinoinensis HOM05D000651 ORTHO05D003435 3.4e-15 84.7 77 62.3
SGA_v2.0_scaffold119G32660 Striga asiatica HOM05D000651 ORTHO05D003435 3.4e-15 84.7 77 59.7
Ah.02g127800 Amaranthus hybridus HOM05D000651 ORTHO05D003435 4.4e-15 84.3 77 58.4
RcHm_v2.0_Chr6g0287801 Rosa chinensis HOM05D000651 ORTHO05D003435 4.4e-15 84.3 77 61.0
TWI79G0957 Tripterygium wilfordii HOM05D000651 ORTHO05D003435 4.4e-15 84.3 77 57.1
Glyma.20G015100 Glycine max HOM05D000651 ORTHO05D003435 5.7e-15 84.0 77 58.4
Gorai.012G181600 Gossypium raimondii HOM05D000651 ORTHO05D003435 5.7e-15 84.0 77 55.8
Manes.03G131725 Manihot esculenta HOM05D000651 ORTHO05D003435 5.7e-15 84.0 77 59.7
Sabra05G0050800 Salix brachista HOM05D000651 ORTHO05D003435 5.7e-15 84.0 77 59.7
Atru.chr2.99 Acer truncatum HOM05D000651 ORTHO05D003435 7.5e-15 83.6 77 57.1
Ciclev10014786m.g Citrus clementina HOM05D000651 ORTHO05D003435 7.5e-15 83.6 77 58.4
CAN.G888.18 Capsicum annuum HOM05D000651 ORTHO05D003435 9.8e-15 83.2 77 54.5
CiPaw.06G051000 Carya illinoinensis HOM05D000651 ORTHO05D003435 9.8e-15 83.2 78 61.5
Sabra08G0098400 Salix brachista HOM05D000651 ORTHO05D003435 9.8e-15 83.2 77 58.4
Lj3C872T1 Lonicera japonica HOM05D000651 ORTHO05D003435 1.3e-14 82.8 76 56.6
VMungo1215G3036 Vigna mungo HOM05D000651 ORTHO05D003435 1.3e-14 82.8 77 61.0
Manes.15G128000 Manihot esculenta HOM05D000651 ORTHO05D003435 1.7e-14 82.4 77 58.4
Phvul.002G094600 Phaseolus vulgaris HOM05D000651 ORTHO05D003435 1.7e-14 82.4 77 59.7
Lsat_1_v5_gn_3_55001 Lactuca sativa HOM05D000651 ORTHO05D003435 2.2e-14 82.0 77 57.1
Prupe.1G325200 Prunus persica HOM05D000651 ORTHO05D003435 2.2e-14 82.0 77 59.7
FvH4_2g21240 Fragaria vesca HOM05D000651 ORTHO05D003435 2.9e-14 81.6 78 59.0
FAN20G3070 Fragaria x ananassa HOM05D000651 ORTHO05D003435 2.9e-14 81.6 78 59.0
FAN24G0006 Fragaria x ananassa HOM05D000651 ORTHO05D003435 2.9e-14 81.6 78 59.0
VMungo0251G0324 Vigna mungo HOM05D000651 ORTHO05D003435 2.9e-14 81.6 77 59.7
Cc11_g08610 Coffea canephora HOM05D000651 ORTHO05D003435 3.7e-14 81.3 77 55.8
FAN15G1327 Fragaria x ananassa HOM05D000651 ORTHO05D003435 3.7e-14 81.3 78 59.0
Oeu019966.1 Olea europaea HOM05D000651 ORTHO05D003435 3.7e-14 81.3 77 55.8
Oeu032024.1 Olea europaea HOM05D000651 ORTHO05D003435 3.7e-14 81.3 77 54.5
arahy.Tifrunner.gnm1.ann1.21IKS3 Arachis hypogaea HOM05D000651 ORTHO05D003435 4.9e-14 80.9 78 56.4
arahy.Tifrunner.gnm1.ann1.7T6UUP Arachis hypogaea HOM05D000651 ORTHO05D003435 4.9e-14 80.9 78 56.4
Phvul.002G094800 Phaseolus vulgaris HOM05D000651 ORTHO05D003435 4.9e-14 80.9 77 58.4
RcHm_v2.0_Chr4g0441341 Rosa chinensis HOM05D000651 ORTHO05D003435 4.9e-14 80.9 78 60.3
FvH4_4g32480 Fragaria vesca HOM05D000651 ORTHO05D003435 6.3e-14 80.5 78 60.3
Glyma.07G218400 Glycine max HOM05D000651 ORTHO05D003435 6.3e-14 80.5 77 57.1
Glyma.20G015400 Glycine max HOM05D000651 ORTHO05D003435 8.3e-14 80.1 77 55.8
Potri.008G129850 Populus trichocarpa HOM05D000651 ORTHO05D003435 8.3e-14 80.1 77 58.4
ECA240G4370 Erigeron canadensis HOM05D000651 ORTHO05D003435 1.1e-13 79.7 76 52.6
CANSAT64G1864 Cannabis sativa HOM05D000651 ORTHO05D003435 1.8e-13 79.0 77 55.8
Eucgr.G02184 Eucalyptus grandis HOM05D000651 ORTHO05D003435 1.8e-13 79.0 77 54.5
ECA246G3348 Erigeron canadensis HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 51.9
Migut.G00087 Erythranthe guttata HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 54.5
Glyma.20G015600 Glycine max HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 55.8
HanXRQChr02g0035871 Helianthus annuus HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 53.2
Lalb_Chr05g0219521 Lupinus albus HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 55.8
Sopen05g002380 Solanum pennellii HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 53.2
PGSC0003DMG400022611 Solanum tuberosum HOM05D000651 ORTHO05D003435 2.4e-13 78.6 77 53.2
COL.COLO4_13097 Corchorus olitorius HOM05D000651 ORTHO05D003435 3.2e-13 78.2 78 52.6
Lj4g0025550 Lotus japonicus HOM05D000651 ORTHO05D003435 3.2e-13 78.2 79 55.7
Nitab4.5_0000742g0200 Nicotiana tabacum HOM05D000651 ORTHO05D003435 3.2e-13 78.2 77 50.6
CAN.G159.3 Capsicum annuum HOM05D000651 ORTHO05D003435 4.1e-13 77.8 77 51.9
MD13G1025000 Malus domestica HOM05D000651 ORTHO05D003435 4.1e-13 77.8 77 54.5
vmacro00148 Vaccinium macrocarpon HOM05D000651 ORTHO05D000939 4.1e-13 77.8 76 57.9
DCAR_030222 Daucus carota HOM05D000651 ORTHO05D003435 5.4e-13 77.4 77 55.8
FAN17G1132 Fragaria x ananassa HOM05D000651 ORTHO05D003435 5.4e-13 77.4 78 59.0
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 5.4e-13 77.4 78 57.7
FAN07G2206 Fragaria x ananassa HOM05D000651 ORTHO05D003435 7.0e-13 77.0 78 59.0
Glyma.20G016750 Glycine max HOM05D000651 ORTHO05D003435 9.2e-13 76.6 77 54.5
Os05g0582800 Oryza sativa ssp. japonica HOM05D000651 ORTHO05D003435 9.2e-13 76.6 76 55.3
Sc04g0005430 Simmondsia chinensis HOM05D000058 ORTHO05D003435 9.2e-13 76.6 63 61.9
DCAR_030221 Daucus carota HOM05D000651 ORTHO05D003435 1.2e-12 76.3 77 57.1
Haze_10678 Corylus avellana HOM05D000651 ORTHO05D003435 2.0e-12 75.5 76 57.9
CsaV3_5G013850 Cucumis sativus L. HOM05D000651 ORTHO05D003435 2.0e-12 75.5 77 51.9
Solyc05g006450.3 Solanum lycopersicum HOM05D000651 ORTHO05D003435 2.0e-12 75.5 77 51.9
MBI10_g02382_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D003435 2.7e-12 75.1 71 56.3
Manes.17G077400 Manihot esculenta HOM05D000651 ORTHO05D003435 2.7e-12 75.1 72 56.9
Sed0020091 Sechium edule HOM05D000651 ORTHO05D003435 2.7e-12 75.1 77 53.2
Ca_18735_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003435 3.5e-12 74.7 79 54.4
FvH4_4g32490 Fragaria vesca HOM05D000651 ORTHO05D003435 4.6e-12 74.3 78 52.6
FAN12G3244 Fragaria x ananassa HOM05D000651 ORTHO05D003435 4.6e-12 74.3 78 52.6
MD16G1027500 Malus domestica HOM05D000651 ORTHO05D003435 4.6e-12 74.3 77 53.2
Peaxi162Scf00159g00827 Petunia axillaris HOM05D000651 ORTHO05D003435 4.6e-12 74.3 77 46.8
unitig_749.g13365 Utricularia gibba HOM05D000651 ORTHO05D003435 5.9e-12 73.9 77 53.2
MELO3C018309.2 Cucumis melo HOM05D000651 ORTHO05D003435 7.8e-12 73.6 77 50.6
FAN17G0487 Fragaria x ananassa HOM05D000651 ORTHO05D003435 7.8e-12 73.6 78 53.8
RcHm_v2.0_Chr4g0441351 Rosa chinensis HOM05D000651 ORTHO05D003435 1.0e-11 73.2 78 52.6
Dinv07652 Davidia involucrata HOM05D000651 ORTHO05D003435 2.3e-11 72.0 69 55.1
Medtr4g084710 Medicago truncatula HOM05D000651 ORTHO05D003435 2.3e-11 72.0 80 57.5
Psat7g128480 Pisum sativum HOM05D000651 ORTHO05D003435 2.3e-11 72.0 81 53.1
A06p11020 Brassica napus HOM05D000651 ORTHO05D003435 2.9e-11 71.6 77 50.6
Peaxi162Scf00159g00084 Petunia axillaris HOM05D000651 ORTHO05D003435 2.9e-11 71.6 77 46.8
SalBow8G2659 Salvia bowleyana HOM05D000651 ORTHO05D003435 3.9e-11 71.2 77 50.6
TPR.G1323 Trifolium pratense HOM05D000651 ORTHO05D003435 3.9e-11 71.2 80 52.5
BcaC05g25437 Brassica carinata HOM05D000651 ORTHO05D003435 5.0e-11 70.9 77 49.4
BolC5t30051H Brassica oleracea HOM05D000651 ORTHO05D003435 5.0e-11 70.9 77 49.4
BraA06t24282Z Brassica rapa HOM05D000651 ORTHO05D003435 5.0e-11 70.9 77 49.4
BraA09t41537Z Brassica rapa HOM05D000651 ORTHO05D003435 6.6e-11 70.5 77 49.4
Cpa.g.sc65.145 Carica papaya HOM05D000651 ORTHO05D003435 6.6e-11 70.5 63 58.7
Psat2g004720 Pisum sativum HOM05D000651 ORTHO05D003435 6.6e-11 70.5 80 53.8
Sp1g13390 Schrenkiella parvula HOM05D000651 ORTHO05D003435 6.6e-11 70.5 77 48.1
BcaB02g06564 Brassica carinata HOM05D000651 ORTHO05D003435 8.6e-11 70.1 77 49.4
Haze_10895 Corylus avellana HOM05D000651 ORTHO05D003435 8.6e-11 70.1 62 56.5
AL1G27060 Arabidopsis lyrata HOM05D000651 ORTHO05D003435 1.1e-10 69.7 77 48.1
SalBow8G0771 Salvia bowleyana HOM05D000651 ORTHO05D003435 1.1e-10 69.7 77 50.6
Aa31LG1G110 Aethionema arabicum HOM05D000651 ORTHO05D003435 1.5e-10 69.3 77 46.8
C05p13070 Brassica napus HOM05D000651 ORTHO05D003435 1.5e-10 69.3 77 48.1
CARHR015540 Cardamine hirsuta HOM05D000651 ORTHO05D003435 1.5e-10 69.3 77 45.5
C08p45230 Brassica napus HOM05D000651 ORTHO05D003435 1.9e-10 68.9 77 49.4
BolC8t52071H Brassica oleracea HOM05D000651 ORTHO05D003435 1.9e-10 68.9 77 49.4
Medtr5g097180 Medicago truncatula HOM05D000651 ORTHO05D003435 1.9e-10 68.9 80 55.0
Dinv14428 Davidia involucrata HOM05D000651 ORTHO05D003435 2.5e-10 68.6 49 73.5
PGR119G2507 Punica granatum HOM05D000651 ORTHO05D003435 2.5e-10 68.6 78 55.1
ClCG07G006600 Citrullus lanatus HOM05D000651 ORTHO05D003435 3.3e-10 68.2 78 51.3
A09p61650 Brassica napus HOM05D000651 ORTHO05D003435 4.3e-10 67.8 77 46.8
Carub.0001s1477 Capsella rubella HOM05D000651 ORTHO05D003435 4.3e-10 67.8 77 46.8
AT1G15000 Arabidopsis thaliana HOM05D000651 ORTHO05D003435 5.6e-10 67.4 77 46.8
BcaC05g25432 Brassica carinata HOM05D000651 ORTHO05D003435 5.6e-10 67.4 77 46.8
Thhalv10007602m.g Eutrema salsugineum HOM05D000651 ORTHO05D003435 5.6e-10 67.4 77 46.8
Haze_24963 Corylus avellana HOM05D000651 ORTHO05D003435 9.5e-10 66.6 69 56.5
PGR119G0102 Punica granatum HOM05D000651 ORTHO05D003435 1.2e-09 66.2 78 51.3
Haze_20473 Corylus avellana HOM05D000651 ORTHO05D003435 1.6e-09 65.9 65 58.5
SGA_v2.0_scaffold67G22578 Striga asiatica HOM05D000651 ORTHO05D003435 2.1e-09 65.5 76 51.3
unitig_748.g8704 Utricularia gibba HOM05D000651 ORTHO05D003435 2.8e-09 65.1 78 51.3
Zm00001eb297170 Zea mays HOM05D000651 ORTHO05D003435 3.6e-09 64.7 77 46.8
Ciclev10013479m.g Citrus clementina HOM05D000651 ORTHO05D003435 6.2e-09 63.9 69 49.3
THA.LOC104824145 Tarenaya hassleriana HOM05D000651 ORTHO05D003435 6.2e-09 63.9 77 42.9
SMO347G0171 Selaginella moellendorffii HOM05D000651 ORTHO05D003435 1.4e-08 62.8 82 42.7
Nn1g07930 Nelumbo nucifera HOM05D000651 ORTHO05D003435 8.9e-08 60.1 77 53.2
SEGI_12485 Sequoiadendron giganteum HOM05D000651 ORTHO05D003435 2.0e-07 58.9 82 39.0
Nn1g08502 Nelumbo nucifera HOM05D000651 ORTHO05D003435 2.6e-07 58.5 77 48.1
Pp3c11_6670 Physcomitrium patens HOM05D000651 ORTHO05D003435 3.4e-07 58.2 82 41.5
Mapoly0170s0029 Marchantia polymorpha HOM05D000651 ORTHO05D003435 1.3e-06 56.2 81 40.7
Dinv24540 Davidia involucrata HOM05D000651 ORTHO05D003435 2.2e-06 55.5 49 57.1
arahy.Tifrunner.gnm1.ann1.QH9D47 Arachis hypogaea HOM05D000651 ORTHO05D003435 3.7e-06 54.7 81 49.4
SEGI_32141 Sequoiadendron giganteum HOM05D000651 ORTHO05D003435 3.7e-06 54.7 81 38.3
AagrBONN_evm.TU.Sc2ySwM_117.2270 Anthoceros agrestis HOM05D000651 ORTHO05D003435 4.9e-06 54.3 81 40.7
Pp3c10_8860 Physcomitrium patens HOM05D000651 ORTHO05D003435 8.3e-06 53.5 80 36.2


User provided reference genes

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