Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 3.4e-101 371.7 191 100.0
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 3.9e-33 145.6 101 79.2
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 2.8e-31 139.4 101 73.3
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 5.3e-30 135.2 102 73.5
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 3.4e-29 132.5 99 71.7
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.9e-29 131.7 102 75.5
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 5.9e-29 131.7 102 73.5
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 1.0e-28 131.0 102 75.5
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.7e-28 130.2 102 75.5
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.7e-28 130.2 102 74.5
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 3.8e-28 129.0 104 73.1
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 3.8e-28 129.0 102 74.5
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 3.8e-28 129.0 102 71.6
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 5.0e-28 128.6 103 74.8
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 8.5e-28 127.9 111 67.6
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.1e-27 127.5 105 69.5
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 1.4e-27 127.1 102 73.5
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.9e-27 126.7 103 73.8
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.9e-27 126.7 103 73.8
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 3.2e-27 125.9 102 72.5
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 4.2e-27 125.6 111 66.7
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 5.5e-27 125.2 109 67.9
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 7.2e-27 124.8 102 71.6
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 9.4e-27 124.4 111 66.7
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 9.4e-27 124.4 102 73.5
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 1.2e-26 124.0 101 66.3
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 1.6e-26 123.6 104 69.2
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 1.6e-26 123.6 105 66.7
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 2.1e-26 123.2 99 70.7
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 2.1e-26 123.2 98 71.4
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 2.7e-26 122.9 104 66.3
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 2.7e-26 122.9 104 71.2
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 2.7e-26 122.9 108 65.7
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 6.1e-26 121.7 103 69.9
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 7.9e-26 121.3 103 68.0
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 7.9e-26 121.3 103 67.0
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 7.9e-26 121.3 102 71.6
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 7.9e-26 121.3 102 71.6
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.0e-25 120.9 102 68.6
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.0e-25 120.9 105 66.7
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 3.0e-25 119.4 100 69.0
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 3.0e-25 119.4 102 65.7
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 3.0e-25 119.4 104 72.1
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 3.0e-25 119.4 108 59.3
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 5.2e-25 118.6 107 63.6
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 5.2e-25 118.6 102 65.7
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 5.2e-25 118.6 95 73.7
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 6.7e-25 118.2 102 64.7
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.1e-24 117.5 103 67.0
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 2.0e-24 116.7 104 62.5
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.0e-24 116.7 102 63.7
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 2.0e-24 116.7 102 63.7
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.0e-24 116.7 74 83.8
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 2.6e-24 116.3 103 67.0
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 2.6e-24 116.3 102 67.6
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 4.4e-24 115.5 102 64.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 5.7e-24 115.2 102 64.7
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 5.7e-24 115.2 102 64.7
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 5.7e-24 115.2 103 65.0
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 7.4e-24 114.8 101 65.3
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 9.7e-24 114.4 101 64.4
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 9.7e-24 114.4 103 63.1
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 9.7e-24 114.4 107 64.5
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 9.7e-24 114.4 102 66.7
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 9.7e-24 114.4 105 63.8
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.3e-23 114.0 105 61.9
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.3e-23 114.0 99 58.6
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 1.3e-23 114.0 93 71.0
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.3e-23 114.0 101 65.3
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.3e-23 114.0 105 63.8
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.2e-23 113.2 102 63.7
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.2e-23 113.2 105 63.8
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 2.8e-23 112.8 105 63.8
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 4.8e-23 112.1 101 61.4
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 4.8e-23 112.1 105 63.8
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 6.3e-23 111.7 101 64.4
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 6.3e-23 111.7 105 62.9
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 1.1e-22 110.9 102 63.7
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 1.1e-22 110.9 102 63.7
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.4e-22 110.5 102 61.8
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 2.4e-22 109.8 102 61.8
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.4e-22 109.8 102 60.8
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 2.4e-22 109.8 103 61.2
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 3.1e-22 109.4 92 68.5
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 3.1e-22 109.4 105 64.8
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 3.1e-22 109.4 100 62.0
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 5.3e-22 108.6 104 58.7
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 5.3e-22 108.6 104 59.6
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 5.3e-22 108.6 106 57.5
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 1.2e-21 107.5 102 60.8
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.6e-21 107.1 102 60.8
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 2.0e-21 106.7 91 68.1
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 2.6e-21 106.3 98 60.2
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 2.6e-21 106.3 107 57.0
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 2.6e-21 106.3 101 58.4
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 2.6e-21 106.3 100 68.0
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.5e-21 105.9 102 59.8
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.5e-21 105.9 102 59.8
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 4.5e-21 105.5 102 57.8
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 5.9e-21 105.1 106 56.6
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 7.7e-21 104.8 99 58.6
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.3e-20 104.0 106 57.5
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.3e-20 104.0 103 56.3
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 1.7e-20 103.6 85 69.4
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 5.0e-20 102.1 101 56.4
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 6.5e-20 101.7 100 67.0
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 6.5e-20 101.7 99 56.6
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 8.5e-20 101.3 106 61.3
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 1.1e-19 100.9 103 61.2
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 1.5e-19 100.5 100 59.0
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 1.9e-19 100.1 98 62.2
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 1.9e-19 100.1 94 61.7
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 2.5e-19 99.8 101 58.4
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 4.2e-19 99.0 103 62.1
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 4.2e-19 99.0 103 60.2
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 1.6e-18 97.1 82 67.1
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 2.7e-18 96.3 99 56.6
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 4.7e-18 95.5 78 62.8
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 8.0e-18 94.7 103 57.3
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.4e-17 94.0 103 58.3
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.4e-17 94.0 103 56.3
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.8e-17 93.6 103 56.3
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.8e-17 93.6 90 62.2
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 4.0e-17 92.4 103 60.2
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 4.0e-17 92.4 103 58.3
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 4.0e-17 92.4 103 57.3
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 5.2e-17 92.0 104 55.8
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 5.2e-17 92.0 99 58.6
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 5.2e-17 92.0 83 63.9
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 6.7e-17 91.7 101 51.5
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 6.7e-17 91.7 101 50.5
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 1.5e-16 90.5 98 57.1
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 2.0e-16 90.1 106 50.9
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 2.0e-16 90.1 100 52.0
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 3.3e-16 89.4 92 55.4
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 5.7e-16 88.6 103 54.4
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 5.7e-16 88.6 104 53.8
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 5.7e-16 88.6 104 53.8
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.7e-16 88.6 102 53.9
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 7.5e-16 88.2 104 53.8
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 7.5e-16 88.2 104 53.8
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 7.5e-16 88.2 104 53.8
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 9.7e-16 87.8 103 54.4
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 9.7e-16 87.8 74 60.8
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 1.3e-15 87.4 103 56.3
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-15 87.4 104 53.8
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 1.3e-15 87.4 104 53.8
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.3e-15 87.4 103 56.3
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.3e-15 87.4 102 54.9
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.3e-15 87.4 102 53.9
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 1.7e-15 87.0 103 54.4
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 2.2e-15 86.7 104 53.8
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 6.3e-15 85.1 104 53.8
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 6.3e-15 85.1 104 53.8
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 6.3e-15 85.1 104 53.8
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 1.1e-14 84.3 103 53.4
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.4e-14 84.0 103 53.4
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 1.8e-14 83.6 104 53.8
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.8e-14 83.6 104 53.8
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 2.4e-14 83.2 98 51.0
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 2.4e-14 83.2 91 56.0
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 5.3e-14 82.0 104 52.9
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 5.3e-14 82.0 104 52.9
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 5.3e-14 82.0 104 52.9
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 7.0e-14 81.6 92 56.5
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 7.0e-14 81.6 104 52.9
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 7.0e-14 81.6 104 52.9
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 9.1e-14 81.3 92 51.1
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 9.1e-14 81.3 73 54.8
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 3.5e-13 79.3 81 63.0
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 5.9e-13 78.6 94 54.3
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 7.7e-13 78.2 89 56.2
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.0e-12 77.8 89 56.2
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 6.5e-12 75.1 110 42.7
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 1.1e-11 74.3 80 48.8
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 7.2e-11 71.6 94 51.1
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-10 70.9 94 51.1
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 1.2e-10 70.9 94 51.1
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 1.6e-10 70.5 94 51.1
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 3.6e-10 69.3 79 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 1.0e-09 67.8 51 60.8
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 1.4e-09 67.4 79 51.9
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 3.0e-09 66.2 90 47.8
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 3.0e-09 66.2 84 45.2
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 1.3e-07 60.8 55 58.2
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 6.3e-07 58.5 60 58.3
Aqoxy1G01707 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 3.1e-06 56.2 55 49.1


User provided reference genes

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