Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0683 Trochodendron aralioides HOM05D002191 ORTHO05D031251 1.1e-26 122.5 60 100.0
GSVIVG01009482001 Vitis vinifera HOM05D002191 ORTHO05D002292 1.1e-10 69.3 47 74.5
Gohir.D06G017500 Gossypium hirsutum HOM05D002191 ORTHO05D002292 2.5e-10 68.2 47 74.5
Gorai.010G020400 Gossypium raimondii HOM05D002191 ORTHO05D002292 2.5e-10 68.2 47 74.5
COL.COLO4_26522 Corchorus olitorius HOM05D002191 ORTHO05D002292 3.3e-10 67.8 47 74.5
Dinv35950 Davidia involucrata HOM05D002191 ORTHO05D002292 3.3e-10 67.8 48 72.9
Duzib116G0100 Durio zibethinus HOM05D002191 ORTHO05D002292 4.3e-10 67.4 47 72.3
Gohir.A06G019100 Gossypium hirsutum HOM05D002191 ORTHO05D002292 4.3e-10 67.4 47 72.3
Atru.chr13.706_Atru.chr13.707 Acer truncatum HOM05D002191 ORTHO05D002292 5.6e-10 67.0 47 72.3
Potri.014G027900 Populus trichocarpa HOM05D002191 ORTHO05D002292 5.6e-10 67.0 47 72.3
Aqoxy5G01223 Aquilegia oxysepala HOM05D002191 ORTHO05D031251 9.5e-10 66.2 51 76.5
Nn5g30283 Nelumbo nucifera HOM05D002191 ORTHO05D002292 9.5e-10 66.2 47 72.3
Duzib093G1665 Durio zibethinus HOM05D002191 ORTHO05D002292 1.2e-09 65.9 48 72.9
Nn1g04838 Nelumbo nucifera HOM05D002191 ORTHO05D002292 1.2e-09 65.9 47 72.3
Dinv39306 Davidia involucrata HOM05D002191 ORTHO05D002292 1.6e-09 65.5 47 70.2
Psat6g012960 Pisum sativum HOM05D002191 ORTHO05D002292 2.1e-09 65.1 47 70.2
TAR381G1221 Trochodendron aralioides HOM05D002191 ORTHO05D002292 2.1e-09 65.1 52 71.2
Ciclev10000692m.g Citrus clementina HOM05D002191 ORTHO05D002292 2.8e-09 64.7 47 70.2
Sabra02G0098300 Salix brachista HOM05D002191 ORTHO05D002292 2.8e-09 64.7 47 70.2
Sabra14G0019000 Salix brachista HOM05D002191 ORTHO05D002292 2.8e-09 64.7 47 70.2
CSS0019866 Camellia sinensis var. sinensis HOM05D002191 ORTHO05D002292 3.6e-09 64.3 47 68.1
Cpa.g.sc49.29 Carica papaya HOM05D002191 ORTHO05D002292 3.6e-09 64.3 46 69.6
Duzib041G0280 Durio zibethinus HOM05D002191 ORTHO05D002292 3.6e-09 64.3 47 72.3
Actinidia38062 Actinidia chinensis HOM05D002191 ORTHO05D002292 4.7e-09 63.9 48 68.8
Manes.18G038200 Manihot esculenta HOM05D002191 ORTHO05D002292 4.7e-09 63.9 47 70.2
QL02p004649 Quercus lobata HOM05D002191 ORTHO05D002292 4.7e-09 63.9 46 69.6
Hma1.2p1_2112F.1_g314230 Hydrangea macrophylla HOM05D002191 ORTHO05D031251 6.2e-09 63.5 51 64.7
CANSAT25G2991 Cannabis sativa HOM05D002191 ORTHO05D002292 8.1e-09 63.2 46 67.4
Potri.002G125200 Populus trichocarpa HOM05D002191 ORTHO05D002292 8.1e-09 63.2 47 70.2
Eucgr.F02334 Eucalyptus grandis HOM05D002191 ORTHO05D002292 1.4e-08 62.4 46 69.6
TPR.G3808 Trifolium pratense HOM05D002191 ORTHO05D002292 1.4e-08 62.4 47 68.1
TAR625G0689 Trochodendron aralioides HOM05D002191 ORTHO05D002292 1.4e-08 62.4 48 68.8
Hma1.2p1_0360F.1_g135580 Hydrangea macrophylla HOM05D002191 ORTHO05D002292 1.8e-08 62.0 52 63.5
Oeu012422.2 Olea europaea HOM05D002191 ORTHO05D002292 1.8e-08 62.0 47 66.0
vmacro04445 Vaccinium macrocarpon HOM05D002191 ORTHO05D002292 2.3e-08 61.6 48 66.7
Glyma.14G083500 Glycine max HOM05D002191 ORTHO05D002292 3.1e-08 61.2 45 68.9
Glyma.17G241500 Glycine max HOM05D002191 ORTHO05D002292 3.1e-08 61.2 45 68.9
Medtr1g019280 Medicago truncatula HOM05D002191 ORTHO05D002292 3.1e-08 61.2 45 68.9
Phvul.001G022700 Phaseolus vulgaris HOM05D002191 ORTHO05D002292 3.1e-08 61.2 45 68.9
PGR031G3008 Punica granatum HOM05D002191 ORTHO05D002292 3.1e-08 61.2 47 70.2
Rhsim07G0228000 Rhododendron simsii HOM05D002191 ORTHO05D002292 3.1e-08 61.2 48 64.6
VMungo0647G1146 Vigna mungo HOM05D002191 ORTHO05D002292 3.1e-08 61.2 45 68.9
MSTRG.22258 Avicennia marina HOM05D002191 ORTHO05D002292 4.0e-08 60.8 56 60.7
Manes.05G174600 Manihot esculenta HOM05D002191 ORTHO05D002292 5.2e-08 60.5 46 67.4
Cfa018086 Carpinus fangiana HOM05D002191 ORTHO05D002292 6.8e-08 60.1 47 68.1
Ca_13287_v3 Cicer arietinum L. HOM05D002191 ORTHO05D002292 8.9e-08 59.7 45 66.7
Peaxi162Scf00458g00318 Petunia axillaris HOM05D002191 ORTHO05D002292 1.2e-07 59.3 47 63.8
ClCG08G016010 Citrullus lanatus HOM05D002191 ORTHO05D002292 1.5e-07 58.9 47 63.8
MELO3C010849.2 Cucumis melo HOM05D002191 ORTHO05D002292 1.5e-07 58.9 47 63.8
Gohir.A05G203300 Gossypium hirsutum HOM05D002191 ORTHO05D002292 1.5e-07 58.9 43 69.8
Gohir.D05G206400 Gossypium hirsutum HOM05D002191 ORTHO05D002292 1.5e-07 58.9 43 69.8
Gorai.009G212800 Gossypium raimondii HOM05D002191 ORTHO05D002292 1.5e-07 58.9 43 69.8
MELO3C016759.2 Cucumis melo HOM05D002191 ORTHO05D002292 2.0e-07 58.5 47 57.4
Nitab4.5_0000287g0220 Nicotiana tabacum HOM05D002191 ORTHO05D002292 2.0e-07 58.5 48 62.5
CDE08G1143 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 2.6e-07 58.2 48 64.6
Lj1g0019274 Lotus japonicus HOM05D002191 ORTHO05D002292 2.6e-07 58.2 46 63.0
Sed0013931 Sechium edule HOM05D002191 ORTHO05D002292 2.6e-07 58.2 47 61.7
CsaV3_4G034380 Cucumis sativus L. HOM05D002191 ORTHO05D002292 5.8e-07 57.0 46 56.5
Migut.N02715 Erythranthe guttata HOM05D002191 ORTHO05D002292 5.8e-07 57.0 49 59.2
Nitab4.5_0008020g0020 Nicotiana tabacum HOM05D002191 ORTHO05D002292 5.8e-07 57.0 47 61.7
Lj4C771T16 Lonicera japonica HOM05D002191 ORTHO05D002292 7.6e-07 56.6 49 61.2
Lalb_Chr14g0368621 Lupinus albus HOM05D002191 ORTHO05D002292 7.6e-07 56.6 47 63.8
Sp1g34030 Schrenkiella parvula HOM05D002191 ORTHO05D002292 7.6e-07 56.6 54 57.4
AL1G52870 Arabidopsis lyrata HOM05D002191 ORTHO05D002292 9.9e-07 56.2 43 65.1
Prupe.1G434200 Prunus persica HOM05D002191 ORTHO05D002292 1.7e-06 55.5 40 70.0
Sopen04g032410 Solanum pennellii HOM05D002191 ORTHO05D002292 1.7e-06 55.5 48 56.2
PGSC0003DMG402008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 1.7e-06 55.5 48 56.2
Carub.0001s3564 Capsella rubella HOM05D002191 ORTHO05D002292 2.2e-06 55.1 43 62.8
AUR62031368 Chenopodium quinoa HOM05D002191 ORTHO05D002292 2.2e-06 55.1 48 62.5
AUR62043210 Chenopodium quinoa HOM05D002191 ORTHO05D002292 2.2e-06 55.1 48 62.5
Solyc04g078810.4 Solanum lycopersicum HOM05D002191 ORTHO05D002292 2.2e-06 55.1 47 57.4
PGSC0003DMG401008010 Solanum tuberosum HOM05D002191 ORTHO05D002292 2.2e-06 55.1 47 57.4
CiPaw.16G042600 Carya illinoinensis HOM05D002191 ORTHO05D002292 2.9e-06 54.7 47 61.7
CDE04G1850 Ceratophyllum demersum HOM05D002191 ORTHO05D002292 2.9e-06 54.7 48 62.5
ClCG05G019940 Citrullus lanatus HOM05D002191 ORTHO05D002292 2.9e-06 54.7 46 52.2
Lalb_Chr22g0355071 Lupinus albus HOM05D002191 ORTHO05D002292 2.9e-06 54.7 46 65.2
Lalb_Chr24g0399281 Lupinus albus HOM05D002191 ORTHO05D002292 2.9e-06 54.7 47 61.7
arahy.Tifrunner.gnm1.ann1.CE0UAC Arachis hypogaea HOM05D002191 ORTHO05D002292 3.7e-06 54.3 43 65.1
arahy.Tifrunner.gnm1.ann1.ZNK5XH Arachis hypogaea HOM05D002191 ORTHO05D002292 3.7e-06 54.3 43 65.1
Thhalv10011395m.g Eutrema salsugineum HOM05D002191 ORTHO05D002292 3.7e-06 54.3 43 65.1
AT1G45207 Arabidopsis thaliana HOM05D002191 ORTHO05D002292 4.9e-06 53.9 39 66.7
THA.LOC104812570 Tarenaya hassleriana HOM05D002191 ORTHO05D002292 4.9e-06 53.9 46 60.9
CAN.G1030.13 Capsicum annuum HOM05D002191 ORTHO05D002292 6.4e-06 53.5 46 58.7
Cc10_g04500 Coffea canephora HOM05D002191 ORTHO05D002292 8.4e-06 53.1 52 53.8
Hund24033 Selenicereus undatus HOM05D002191 ORTHO05D002292 8.4e-06 53.1 49 59.2
Hund30799 Selenicereus undatus HOM05D002191 ORTHO05D002292 8.4e-06 53.1 49 59.2
TWI56G0639 Tripterygium wilfordii HOM05D002191 ORTHO05D002292 8.4e-06 53.1 47 61.7


User provided reference genes

Program Settings