Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0526 Trochodendron aralioides HOM05D002985 ORTHO05D003335 4.1e-47 191.0 97 100.0
TAR383G0132 Trochodendron aralioides HOM05D002985 ORTHO05D003335 8.2e-11 70.5 35 100.0
Nn8g41106 Nelumbo nucifera HOM05D002985 ORTHO05D003335 1.1e-10 70.1 48 79.2
Sed0000194 Sechium edule HOM05D002985 ORTHO05D003335 3.4e-09 65.1 37 75.7
Sed0007325 Sechium edule HOM05D002985 ORTHO05D003335 4.5e-09 64.7 48 68.8
CSS0042961 Camellia sinensis var. sinensis HOM05D002985 ORTHO05D003335 7.6e-09 63.9 48 66.7
Actinidia03337 Actinidia chinensis HOM05D002985 ORTHO05D003335 1.0e-08 63.5 48 64.6
Cpa.g.sc148.2 Carica papaya HOM05D002985 ORTHO05D003335 1.0e-08 63.5 35 85.7
MELO3C030364.2 Cucumis melo HOM05D002985 ORTHO05D003335 1.0e-08 63.5 51 60.8
PSO170G5630 Papaver somniferum HOM05D002985 ORTHO05D003335 1.3e-08 63.2 47 66.0
ClCG08G012510 Citrullus lanatus HOM05D002985 ORTHO05D003335 1.7e-08 62.8 52 67.3
CsaV3_2G031210 Cucumis sativus L. HOM05D002985 ORTHO05D003335 1.7e-08 62.8 35 80.0
Hma1.2p1_0331F.1_g127500 Hydrangea macrophylla HOM05D002985 ORTHO05D003335 2.2e-08 62.4 87 42.5
MELO3C011170.2 Cucumis melo HOM05D002985 ORTHO05D003335 2.9e-08 62.0 53 60.4
PSO063G0761 Papaver somniferum HOM05D002985 ORTHO05D003335 5.0e-08 61.2 47 63.8
TWI36G0183 Tripterygium wilfordii HOM05D002985 ORTHO05D003335 1.1e-07 60.1 34 85.3
Atru.chr7.2687 Acer truncatum HOM05D002985 ORTHO05D003335 1.4e-07 59.7 35 77.1
MELO3C003602.2 Cucumis melo HOM05D002985 ORTHO05D003335 1.4e-07 59.7 51 56.9
MELO3C011171.2 Cucumis melo HOM05D002985 ORTHO05D003335 1.4e-07 59.7 36 72.2
CsaV3_2G031220 Cucumis sativus L. HOM05D002985 ORTHO05D003335 1.4e-07 59.7 49 61.2
Dinv37494 Davidia involucrata HOM05D002985 ORTHO05D003335 1.4e-07 59.7 48 64.6
Cfa013313 Carpinus fangiana HOM05D002985 ORTHO05D003335 1.9e-07 59.3 35 77.1
CsaV3_3G047270 Cucumis sativus L. HOM05D002985 ORTHO05D003335 1.9e-07 59.3 51 58.8
PSO170G0284 Papaver somniferum HOM05D002985 ORTHO05D003335 1.9e-07 59.3 47 59.6
Manes.03G001200 Manihot esculenta HOM05D002985 ORTHO05D003335 2.5e-07 58.9 33 84.8
CSS0035055 Camellia sinensis var. sinensis HOM05D002985 ORTHO05D003335 3.2e-07 58.5 38 76.3
CiPaw.07G209800 Carya illinoinensis HOM05D002985 ORTHO05D003335 3.2e-07 58.5 34 82.4
vmacro00588 Vaccinium macrocarpon HOM05D002985 ORTHO05D003335 3.2e-07 58.5 48 68.8
Aqoxy7G02672 Aquilegia oxysepala HOM05D003380 ORTHO05D004232 4.2e-07 58.2 33 81.8
Hund03263 Selenicereus undatus HOM05D002985 ORTHO05D003335 4.2e-07 58.2 33 81.8
Lsat_1_v5_gn_5_56481 Lactuca sativa HOM05D002985 ORTHO05D003335 5.5e-07 57.8 35 77.1
PSO063G2312 Papaver somniferum HOM05D002985 ORTHO05D003335 7.2e-07 57.4 47 59.6
Potri.006G278900 Populus trichocarpa HOM05D002985 ORTHO05D003335 7.2e-07 57.4 36 72.2
Prupe.1G456100 Prunus persica HOM05D002985 ORTHO05D003335 7.2e-07 57.4 48 60.4
Sed0007369 Sechium edule HOM05D002985 ORTHO05D003335 1.2e-06 56.6 37 67.6
Ciclev10009652m.g Citrus clementina HOM05D002985 ORTHO05D003335 1.6e-06 56.2 58 56.9
Gohir.A05G066100 Gossypium hirsutum HOM05D002985 ORTHO05D003335 2.1e-06 55.8 33 78.8
Gohir.D05G068500 Gossypium hirsutum HOM05D002985 ORTHO05D003335 2.1e-06 55.8 33 78.8
Gorai.009G069500 Gossypium raimondii HOM05D002985 ORTHO05D003335 2.1e-06 55.8 33 78.8
SEGI_16865 Sequoiadendron giganteum HOM05D002985 ORTHO05D003335 2.1e-06 55.8 38 68.4
Haze_21801 Corylus avellana HOM05D002985 ORTHO05D003335 2.7e-06 55.5 34 76.5
DCAR_000672 Daucus carota HOM05D002985 ORTHO05D003335 2.7e-06 55.5 58 50.0
Duzib150G0693 Durio zibethinus HOM05D002985 ORTHO05D003335 2.7e-06 55.5 35 71.4
FAN20G1725 Fragaria x ananassa HOM05D002985 ORTHO05D003335 2.7e-06 55.5 48 58.3
MD08G1124500 Malus domestica HOM05D002985 ORTHO05D003335 2.7e-06 55.5 35 74.3
PSO063G6138 Papaver somniferum HOM05D002985 ORTHO05D003335 2.7e-06 55.5 47 63.8
Potri.018G003000 Populus trichocarpa HOM05D002985 ORTHO05D003335 2.7e-06 55.5 36 69.4
QL12p025851 Quercus lobata HOM05D002985 ORTHO05D003335 2.7e-06 55.5 58 60.3
SEGI_16291 Sequoiadendron giganteum HOM05D002985 ORTHO05D003335 2.7e-06 55.5 38 68.4
ClCG05G026330 Citrullus lanatus HOM05D002985 ORTHO05D003335 3.6e-06 55.1 49 57.1
Cc06_g20070 Coffea canephora HOM05D002985 ORTHO05D003335 3.6e-06 55.1 37 73.0
MD15G1103200 Malus domestica HOM05D002985 ORTHO05D003335 3.6e-06 55.1 49 61.2
Thecc.09G002700 Theobroma cacao HOM05D002985 ORTHO05D003335 3.6e-06 55.1 33 78.8
CANSAT25G1371 Cannabis sativa HOM05D002985 ORTHO05D003335 4.6e-06 54.7 35 71.4
MBI13_g34298_MAGBIO Magnolia biondii HOM05D002985 ORTHO05D003335 4.6e-06 54.7 33 75.8
RcHm_v2.0_Chr6g0305411 Rosa chinensis HOM05D002985 ORTHO05D003335 4.6e-06 54.7 48 56.2
Sabra18G0003000 Salix brachista HOM05D002985 ORTHO05D003335 4.6e-06 54.7 35 71.4
Sc09g0007410 Simmondsia chinensis HOM05D002985 ORTHO05D003335 4.6e-06 54.7 33 81.8
FvH4_2g36470 Fragaria vesca HOM05D002985 ORTHO05D003335 6.1e-06 54.3 48 56.2
FAN27G1264 Fragaria x ananassa HOM05D002985 ORTHO05D003335 6.1e-06 54.3 48 56.2
Lj1g0000796 Lotus japonicus HOM05D002985 ORTHO05D003335 7.9e-06 53.9 33 78.8


User provided reference genes

Program Settings