Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 2.7e-252 874.8 427 100.0
Actinidia31231 Actinidia chinensis HOM05D004081 ORTHO05D004935 6.7e-174 614.4 403 73.7
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 4.3e-173 611.7 385 77.1
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 1.7e-169 599.7 354 79.1
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 8.5e-169 597.4 355 79.4
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 7.9e-167 590.9 381 75.3
RcHm_v2.0_Chr6g0305921 Rosa chinensis HOM05D004081 ORTHO05D004935 2.3e-166 589.3 403 72.0
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 6.7e-166 587.8 357 77.6
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 8.8e-166 587.4 388 72.9
FvH4_2g35900 Fragaria vesca HOM05D004081 ORTHO05D004935 1.1e-165 587.0 398 71.6
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 1.5e-165 586.6 396 73.2
FAN27G0952 Fragaria x ananassa HOM05D004081 ORTHO05D004935 2.5e-165 585.9 398 71.4
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 5.7e-165 584.7 401 71.6
vmacro11071 Vaccinium macrocarpon HOM05D004081 ORTHO05D004935 9.7e-165 583.9 372 75.5
FAN20G0986 Fragaria x ananassa HOM05D004081 ORTHO05D004935 6.3e-164 581.3 398 71.4
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 6.3e-164 581.3 358 76.5
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.4e-163 580.1 386 73.3
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 1.4e-163 580.1 362 75.7
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 1.8e-163 579.7 349 77.4
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 4.1e-163 578.6 350 76.6
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 2.0e-162 576.2 349 77.7
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 2.9e-161 572.4 352 76.7
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 5.0e-161 571.6 382 71.7
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 6.5e-161 571.2 349 75.9
Aqoxy7G01585 Aquilegia oxysepala HOM05D004081 ORTHO05D004935 1.9e-160 569.7 365 75.1
Manes.03G062100 Manihot esculenta HOM05D004081 ORTHO05D004935 3.2e-160 568.9 401 70.3
PGR004G0014 Punica granatum HOM05D004081 ORTHO05D004935 4.2e-160 568.5 377 73.7
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 9.4e-160 567.4 349 75.4
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 2.1e-159 566.2 381 71.9
Gorai.010G108400 Gossypium raimondii HOM05D004081 ORTHO05D004935 4.7e-159 565.1 393 70.2
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 6.1e-159 564.7 397 69.0
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 7.9e-159 564.3 375 72.5
Gohir.D06G093900 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.0e-158 563.9 393 70.2
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 1.8e-158 563.1 351 75.8
TWI34G1344 Tripterygium wilfordii HOM05D004081 ORTHO05D004935 2.3e-158 562.8 389 71.2
Manes.16G071800 Manihot esculenta HOM05D004081 ORTHO05D004935 3.9e-158 562.0 391 70.6
Sabra06G0188200 Salix brachista HOM05D004081 ORTHO05D004935 4.4e-157 558.5 365 74.2
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 7.4e-157 557.8 354 75.1
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 9.7e-157 557.4 352 73.3
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 2.8e-156 555.8 346 76.3
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 3.7e-156 555.4 353 74.5
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 4.8e-156 555.1 349 75.1
Ah.10g035110 Amaranthus hybridus HOM05D004081 ORTHO05D004935 1.4e-155 553.5 364 72.8
PSO566G0156 Papaver somniferum HOM05D004081 ORTHO05D004935 1.8e-155 553.1 358 74.3
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.4e-155 552.7 349 74.5
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 2.4e-155 552.7 352 73.0
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 4.1e-155 552.0 352 73.9
Cfa013350 Carpinus fangiana HOM05D004081 ORTHO05D004935 5.3e-155 551.6 397 68.8
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 5.3e-155 551.6 349 74.5
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 1.5e-154 550.1 347 74.1
PSO782G5115 Papaver somniferum HOM05D004081 ORTHO05D004935 1.5e-154 550.1 358 73.7
Sed0008402 Sechium edule HOM05D004081 ORTHO05D004935 1.7e-153 546.6 361 70.9
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 8.5e-153 544.3 384 68.0
Haze_21871 Corylus avellana HOM05D004081 ORTHO05D004935 1.9e-152 543.1 353 73.7
MELO3C003456.2 Cucumis melo HOM05D004081 ORTHO05D004935 3.6e-151 538.9 359 70.5
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 6.1e-151 538.1 354 72.6
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 6.7e-150 534.6 412 63.6
CsaV3_3G048650 Cucumis sativus L. HOM05D004081 ORTHO05D004935 1.5e-149 533.5 371 68.2
Duzib168G2093 Durio zibethinus HOM05D004081 ORTHO05D004935 1.5e-149 533.5 353 72.5
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 3.3e-149 532.3 370 70.0
ClCG11G015230 Citrullus lanatus HOM05D004081 ORTHO05D004935 5.7e-149 531.6 400 65.0
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 5.7e-149 531.6 328 76.5
SGA_v2.0_scaffold243G44290 Striga asiatica HOM05D004081 ORTHO05D004935 2.8e-148 529.3 333 73.9
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 3.7e-148 528.9 356 71.9
Thecc.09G041700 Theobroma cacao HOM05D004081 ORTHO05D004935 3.7e-148 528.9 350 72.6
AUR62029665 Chenopodium quinoa HOM05D004081 ORTHO05D004935 6.3e-148 528.1 356 71.6
CSS0003690 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 2.4e-147 526.2 304 80.3
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 1.6e-146 523.5 357 70.6
CAN.G21.43 Capsicum annuum HOM05D004081 ORTHO05D004935 2.6e-146 522.7 303 78.5
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.6e-146 522.7 393 66.7
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 3.5e-146 522.3 359 69.9
SalBow4G2011 Salvia bowleyana HOM05D004081 ORTHO05D004935 4.5e-146 521.9 358 69.0
BcaC04g23588 Brassica carinata HOM05D004081 ORTHO05D004935 1.0e-145 520.8 359 67.4
Lsat_1_v5_gn_8_105500 Lactuca sativa HOM05D004081 ORTHO05D004935 6.5e-145 518.1 341 72.7
BolC9t53593H Brassica oleracea HOM05D004081 ORTHO05D004935 1.1e-144 517.3 352 68.2
Psat5g023440 Pisum sativum HOM05D004081 ORTHO05D004935 3.2e-144 515.8 416 62.3
AUR62041725 Chenopodium quinoa HOM05D004081 ORTHO05D004935 1.6e-143 513.5 334 73.1
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 2.1e-143 513.1 349 69.6
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 4.7e-143 511.9 405 64.4
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 6.1e-143 511.5 375 66.9
CiPaw.07G206000 Carya illinoinensis HOM05D004081 ORTHO05D004935 6.1e-143 511.5 305 78.7
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 1.4e-142 510.4 358 69.8
BolC2t11999H Brassica oleracea HOM05D004081 ORTHO05D004935 4.0e-142 508.8 355 65.6
Lj7A705T29 Lonicera japonica HOM05D004081 ORTHO05D004935 3.3e-141 505.8 316 75.0
Os06g0163200 Oryza sativa ssp. japonica HOM05D004081 ORTHO05D004935 3.3e-141 505.8 356 66.6
BcaC03g17893 Brassica carinata HOM05D004081 ORTHO05D004935 5.7e-141 505.0 355 65.4
Thhalv10004493m.g Eutrema salsugineum HOM05D004081 ORTHO05D004935 1.3e-140 503.8 349 66.5
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 1.7e-140 503.4 361 65.7
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 2.2e-140 503.1 367 66.8
CARHR187640 Cardamine hirsuta HOM05D004081 ORTHO05D004935 2.8e-140 502.7 348 66.4
Aa31LG11G4780 Aethionema arabicum HOM05D004081 ORTHO05D004935 8.2e-140 501.1 357 68.1
BcaB04g19768 Brassica carinata HOM05D004081 ORTHO05D004935 8.2e-140 501.1 351 65.0
CSS0038651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 8.2e-140 501.1 304 77.3
Hma1.2p1_2102F.1_g314030 Hydrangea macrophylla HOM05D004081 ORTHO05D004935 1.1e-139 500.7 280 83.6
unitig_748.g7994 Utricularia gibba HOM05D004081 ORTHO05D004935 1.1e-139 500.7 345 68.1
MBI01_g30745_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 1.8e-139 500.0 312 76.0
BcaB07g29982 Brassica carinata HOM05D004081 ORTHO05D004935 9.1e-139 497.7 357 65.5
THA.LOC104815055 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.2e-138 497.3 349 66.2
Sp2g21850 Schrenkiella parvula HOM05D004081 ORTHO05D004935 1.6e-138 496.9 350 65.7
Carub.0006s2355 Capsella rubella HOM05D004081 ORTHO05D004935 5.9e-138 495.0 350 64.9
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 1.0e-137 494.2 355 67.3
AT5G25770 Arabidopsis thaliana HOM05D004081 ORTHO05D004935 1.5e-136 490.3 346 65.6
CSS0042840 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 2.5e-136 489.6 336 71.1
Aa31LG11G4770 Aethionema arabicum HOM05D004081 ORTHO05D004935 3.2e-136 489.2 357 65.8
Lalb_Chr08g0243191 Lupinus albus HOM05D004081 ORTHO05D004935 4.0e-134 482.3 401 59.9
BolC2t12002H Brassica oleracea HOM05D004081 ORTHO05D004935 1.3e-132 477.2 330 65.8
Psat5g023320 Pisum sativum HOM05D004081 ORTHO05D004935 9.1e-131 471.1 304 71.4
Lsat_1_v5_gn_8_134220 Lactuca sativa HOM05D004081 ORTHO05D004935 1.3e-129 467.2 323 68.4
Ciclev10009208m.g Citrus clementina HOM05D004081 ORTHO05D004935 1.1e-128 464.2 263 80.6
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 1.9e-128 463.4 330 68.5
Lsat_1_v5_gn_8_104541 Lactuca sativa HOM05D004081 ORTHO05D004935 9.5e-128 461.1 323 67.8
Rhsim02G0180200 Rhododendron simsii HOM05D001113 ORTHO05D000968 2.0e-125 453.4 356 64.0
THA.LOC104799704 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 7.5e-125 451.4 350 62.0
Lsat_1_v5_gn_8_104800 Lactuca sativa HOM05D004081 ORTHO05D004935 2.1e-119 433.3 323 63.8
CAN.G21.42 Capsicum annuum HOM05D004081 ORTHO05D004935 2.3e-118 429.9 246 80.5
BcaC04g23590 Brassica carinata HOM05D004081 ORTHO05D004935 5.2e-118 428.7 380 56.6
FAN15G1869 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.1e-115 421.0 290 72.1
BcaC03g17895 Brassica carinata HOM05D004081 ORTHO05D004935 3.0e-113 412.9 477 45.1
A09p06100 Brassica napus HOM05D004081 ORTHO05D004935 3.6e-111 406.0 250 70.4
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 1.4e-110 404.1 240 79.6
Dinv30265 Davidia involucrata HOM05D004081 ORTHO05D004935 2.2e-108 396.7 255 78.8
Phvul.009G105800 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 4.1e-107 392.5 380 51.8
Cpa.g.sc7.252 Carica papaya HOM05D004081 ORTHO05D004935 1.7e-105 387.1 271 69.0
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 3.3e-104 382.9 378 53.2
Actinidia13318 Actinidia chinensis HOM05D004081 ORTHO05D004935 4.3e-104 382.5 221 81.0
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 9.5e-104 381.3 244 73.4
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 8.1e-103 378.3 324 59.0
VMungo0768G0001 Vigna mungo HOM05D004081 ORTHO05D004935 3.1e-102 376.3 383 50.4
BolC2t12001H Brassica oleracea HOM05D004081 ORTHO05D004935 1.9e-99 367.1 295 60.3
Lsat_1_v5_gn_8_104461 Lactuca sativa HOM05D004081 ORTHO05D004935 9.2e-99 364.8 379 52.5
CAN.G21.41 Capsicum annuum HOM05D004081 ORTHO05D004935 6.0e-98 362.1 210 76.7
HPP92_021511 Vanilla planifolia HOM05D004081 ORTHO05D004935 1.0e-97 361.3 294 62.9
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 3.9e-97 359.4 349 53.3
Phvul.009G107301 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 7.3e-96 355.1 413 46.5
Mapoly0161s0002 Marchantia polymorpha HOM05D004081 ORTHO05D004935 4.4e-93 345.9 357 49.6
Zm00001eb271420 Zea mays HOM05D004081 ORTHO05D004935 7.6e-93 345.1 246 65.4
AagrBONN_evm.TU.Sc2ySwM_228.1948 Anthoceros agrestis HOM05D004081 ORTHO05D004935 3.2e-91 339.7 373 48.0
CAN.G21.44 Capsicum annuum HOM05D004081 ORTHO05D004935 9.2e-91 338.2 274 62.0
ATR0315G111 Amborella trichopoda HOM05D004081 ORTHO05D004935 3.2e-83 313.2 219 69.9
CSS0013583 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.6e-82 310.8 194 75.8
Eucgr.L00922 Eucalyptus grandis HOM05D004081 ORTHO05D004935 7.8e-82 308.5 236 66.5
ATR0121G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 1.3e-81 307.8 304 52.6
SMO089G0019 Selaginella moellendorffii HOM05D004081 ORTHO05D004935 4.8e-79 299.3 280 50.4
Glyma.04G081600 Glycine max HOM05D004081 ORTHO05D004935 1.4e-78 297.7 192 67.7
CSS0028651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.3e-76 291.2 194 72.7
Lsat_1_v5_gn_8_104201 Lactuca sativa HOM05D004081 ORTHO05D004935 4.6e-74 282.7 330 48.2
THA.LOC104809696 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.0e-68 265.0 194 68.0
Atru.chr7.2143 Acer truncatum HOM05D004081 ORTHO05D004935 2.5e-64 250.4 134 85.1
SEGI_32132 Sequoiadendron giganteum HOM05D004081 ORTHO05D004935 2.6e-53 213.8 177 62.1
Hund03408 Selenicereus undatus HOM05D004081 ORTHO05D004935 3.0e-49 200.3 127 71.7
MCO09G062 Micromonas commoda HOM05D004081 ORTHO05D004935 5.7e-48 196.1 361 33.0
Medtr3g110115 Medicago truncatula HOM05D004081 ORTHO05D004935 1.5e-45 188.0 322 40.7
Lsat_1_v5_gn_0_34401 Lactuca sativa HOM05D004081 ORTHO05D004935 1.3e-44 184.9 207 50.7
Nitab4.5_0000513g0070 Nicotiana tabacum HOM05D004081 ORTHO05D004935 5.0e-44 183.0 332 38.0
Atru.chr7.2142 Acer truncatum HOM05D004081 ORTHO05D004935 5.5e-43 179.5 116 75.9
PRCOL_00003400 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 1.6e-42 177.9 302 31.8
Cre16.g676500 Chlamydomonas reinhardtii HOM05D004081 ORTHO05D004935 1.5e-40 171.4 223 39.0
AL6G37600 Arabidopsis lyrata HOM05D004081 ORTHO05D004935 3.5e-37 160.2 156 48.7
BcaB05g25303 Brassica carinata HOM05D004081 ORTHO05D004935 1.9e-35 154.5 89 75.3
PRCOL_00002146 Prasinoderma coloniale HOM05D004081 ORTHO05D004935 1.0e-25 122.1 207 31.9
Oeu014640.1 Olea europaea HOM05D004081 ORTHO05D025646 1.5e-24 118.2 114 60.5
Ciclev10010051m.g Citrus clementina HOM05D004081 ORTHO05D004935 1.8e-17 94.7 74 62.2
HPP92_021483 Vanilla planifolia HOM05D004081 ORTHO05D004935 3.0e-17 94.0 65 64.6
ATR0241G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.0e-16 91.3 76 53.9
Zm00001eb357480 Zea mays HOM05D002669 ORTHO05D004935 2.4e-14 84.3 69 53.6
Zm00001eb288810 Zea mays HOM05D002669 ORTHO05D004935 5.4e-14 83.2 69 53.6
Cpa.g.sc7.250 Carica papaya HOM05D002779 ORTHO05D003074 1.6e-13 81.6 49 73.5
PGSC0003DMG400019844 Solanum tuberosum HOM05D004081 ORTHO05D004935 2.3e-09 67.8 50 64.0
ATR0121G013 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.0e-08 64.7 71 52.1
MBI14_g24972_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 2.0e-08 64.7 55 56.4
MBI16_g01586_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 7.5e-08 62.8 55 54.5
MD15G1096200 Malus domestica HOM05D004081 ORTHO05D025646 7.5e-08 62.8 46 67.4
Hund03407 Selenicereus undatus HOM05D004081 ORTHO05D025646 2.2e-07 61.2 63 46.0
Glyma.04G081300 Glycine max HOM05D004081 ORTHO05D025646 4.1e-06 57.0 48 58.3


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