Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.6e-239 832.4 427 100.0
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.8e-178 627.9 433 77.6
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 9.7e-149 530.8 443 68.6
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 6.3e-148 528.1 442 64.9
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.6e-127 460.3 438 62.3
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 1.3e-124 450.7 446 59.4
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 6.3e-124 448.4 445 59.1
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 7.0e-123 444.9 441 59.9
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 1.3e-121 440.7 415 61.4
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.8e-118 430.3 446 56.5
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.0e-118 429.1 447 56.2
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.9e-118 427.9 447 55.9
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.2e-117 427.6 447 55.5
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 2.9e-116 422.9 421 59.6
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 1.1e-115 421.0 417 60.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.0e-113 414.5 429 57.6
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 2.3e-113 413.3 430 56.5
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 6.6e-113 411.8 413 60.3
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.3e-112 409.5 449 55.9
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 5.6e-112 408.7 412 59.7
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.1e-111 406.8 412 58.3
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 5.2e-110 402.1 335 66.0
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.2e-109 401.0 432 56.5
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 1.1e-107 394.4 429 56.6
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 1.9e-107 393.7 454 54.6
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.1e-107 392.5 411 56.4
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 1.6e-106 390.6 432 54.4
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.7e-105 387.1 413 55.2
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 1.7e-105 387.1 411 55.0
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 3.0e-105 386.3 448 53.6
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 3.0e-105 386.3 437 54.7
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 3.0e-105 386.3 352 61.1
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 3.9e-105 386.0 432 54.6
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 8.6e-105 384.8 437 52.6
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.9e-104 383.6 421 55.1
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 9.5e-104 381.3 415 55.9
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 8.1e-103 378.3 425 54.4
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 1.4e-102 377.5 434 53.5
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 6.8e-102 375.2 433 53.6
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.2e-101 374.4 417 54.9
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 4.4e-101 372.5 362 59.1
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.3e-100 370.9 416 54.6
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 1.7e-100 370.5 487 48.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 9.2e-99 364.8 416 52.9
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 9.2e-99 364.8 486 48.6
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.2e-98 364.4 413 55.2
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 1.7e-97 360.5 417 52.3
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 3.0e-97 359.8 452 51.5
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 5.1e-97 359.0 409 53.1
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 8.6e-97 358.2 432 50.2
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 8.6e-97 358.2 413 54.2
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 2.5e-96 356.7 413 54.0
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 5.6e-96 355.5 419 52.7
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 9.5e-96 354.8 423 52.5
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 2.1e-95 353.6 413 53.8
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 6.2e-95 352.1 340 58.8
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 6.2e-95 352.1 416 51.4
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 4.0e-94 349.4 423 51.8
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 2.0e-93 347.1 384 53.4
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 1.7e-92 344.0 415 51.1
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 5.4e-91 339.0 459 49.5
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.0e-89 334.7 332 59.3
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 5.1e-89 332.4 441 48.5
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.9e-88 330.5 422 48.8
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 9.6e-88 328.2 418 50.2
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.6e-87 327.4 306 60.8
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.8e-86 323.9 425 52.5
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 2.4e-86 323.6 409 47.7
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 2.4e-86 323.6 323 57.6
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 9.9e-85 318.2 417 48.7
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.2e-82 311.2 291 60.8
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.0e-81 308.1 429 48.0
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.3e-81 307.8 417 48.4
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 3.3e-80 303.1 288 60.1
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 9.6e-80 301.6 309 56.0
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 6.9e-78 295.4 262 61.5
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 9.0e-78 295.0 315 54.3
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 4.5e-77 292.7 406 47.5
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 1.1e-75 288.1 375 50.7
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 9.3e-75 285.0 320 53.8
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 9.3e-75 285.0 422 46.9
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.8e-71 273.5 381 45.1
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 6.9e-70 268.9 327 52.3
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 7.6e-69 265.4 409 46.2
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 2.9e-68 263.5 418 45.2
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 8.4e-68 261.9 403 44.2
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.9e-67 260.8 416 42.3
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 5.5e-67 259.2 412 43.7
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.3e-65 253.8 419 43.7
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 3.0e-65 253.4 331 51.1
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.5e-64 251.1 372 47.3
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 7.4e-64 248.8 302 52.0
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 7.4e-64 248.8 365 46.6
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 9.6e-64 248.4 346 47.1
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 2.6e-61 240.4 256 54.7
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 6.5e-60 235.7 358 45.5
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 2.7e-58 230.3 355 46.5
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.3e-52 211.5 342 45.0
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 9.4e-51 205.3 402 41.3
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.4e-49 201.4 244 53.3
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 5.3e-46 189.5 373 37.8
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 2.3e-41 174.1 350 40.0
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 2.0e-37 161.0 419 34.4
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 2.6e-37 160.6 373 35.1
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 5.9e-37 159.5 196 52.0
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.8e-36 156.8 408 33.6
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 1.5e-35 154.8 277 39.0
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 3.2e-35 153.7 411 34.3
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 4.2e-35 153.3 409 34.5
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 2.1e-34 151.0 367 35.4
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.1e-34 151.0 413 34.4
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 3.6e-34 150.2 368 35.1
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 6.1e-34 149.4 413 34.4
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 8.0e-34 149.1 436 32.1
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 1.1e-32 145.2 431 32.9
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 5.7e-32 142.9 308 37.0
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 1.8e-30 137.9 362 34.3
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 2.4e-30 137.5 409 33.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 4.1e-30 136.7 301 38.5
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.6e-29 134.8 432 32.2
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 5.9e-29 132.9 433 32.1
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 1.3e-28 131.7 405 33.3
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 2.2e-28 131.0 417 34.3
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 5.0e-28 129.8 132 53.8
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 1.4e-25 121.7 456 31.8
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 3.0e-25 120.6 290 36.9
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 2.0e-24 117.9 125 56.8
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 5.7e-24 116.3 427 30.9
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 3.5e-21 107.1 423 31.2
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 3.5e-21 107.1 424 32.1
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 8.8e-17 92.4 194 38.7
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.2e-15 87.8 153 41.8
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 3.8e-12 77.0 80 55.0
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 5.5e-11 73.2 104 45.2
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 2.8e-10 70.9 175 32.6
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 6.8e-09 66.2 175 33.1
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 6.8e-09 66.2 175 31.4
Dinv07115 Davidia involucrata HOM05D005141 ORTHO05D030953 4.9e-07 60.1 85 52.9


User provided reference genes

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