Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 9.1e-75 283.9 188 100.0
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 1.8e-51 206.5 186 64.0
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.2e-47 193.7 189 74.6
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.6e-42 176.8 189 72.5
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 2.3e-41 172.9 190 70.5
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 2.3e-41 172.9 199 59.3
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.5e-40 170.2 186 73.1
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.9e-40 169.9 186 72.6
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.9e-40 169.9 193 74.1
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.5e-40 169.5 194 58.2
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.5e-40 169.5 194 59.3
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 5.6e-40 168.3 188 69.1
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 7.3e-40 167.9 194 57.7
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 9.5e-40 167.5 188 66.0
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.8e-39 166.0 194 67.0
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 4.0e-38 162.2 187 72.7
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 6.8e-38 161.4 190 72.6
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 1.5e-37 160.2 187 68.4
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 4.4e-37 158.7 186 68.8
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.3e-36 157.1 188 68.1
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.3e-36 157.1 188 68.1
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 3.7e-36 155.6 191 70.2
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.1e-35 154.1 188 64.9
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 1.4e-35 153.7 189 68.8
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.4e-35 152.9 194 59.3
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 5.4e-35 151.8 187 69.5
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 1.2e-34 150.6 186 64.0
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.5e-34 149.1 194 62.4
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.0e-33 147.5 188 53.2
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.3e-33 147.1 194 59.3
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 1.7e-33 146.7 188 54.8
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 1.7e-33 146.7 188 64.9
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 2.3e-33 146.4 190 50.0
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 3.0e-33 146.0 188 68.1
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 1.5e-32 143.7 190 63.2
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 3.3e-32 142.5 135 82.2
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 3.3e-32 142.5 198 52.0
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 5.6e-32 141.7 186 68.3
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.2e-31 140.6 131 65.6
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 1.2e-31 140.6 186 49.5
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.2e-31 140.6 191 47.6
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-31 140.2 177 64.4
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 2.8e-31 139.4 190 48.4
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 2.8e-31 139.4 190 48.4
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 3.6e-31 139.0 199 55.3
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 4.7e-31 138.7 193 64.8
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 6.2e-31 138.3 174 65.5
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 8.1e-31 137.9 123 68.3
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 8.1e-31 137.9 190 66.3
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 1.8e-30 136.7 192 58.3
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 3.1e-30 136.0 198 54.0
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 4.0e-30 135.6 192 63.5
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 5.2e-30 135.2 191 52.4
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 8.9e-30 134.4 193 49.2
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.2e-29 134.0 194 45.9
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.3e-28 130.6 168 67.9
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 6.4e-28 128.3 194 59.8
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 6.4e-28 128.3 186 49.5
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.2e-26 124.0 186 50.0
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 1.6e-26 123.6 196 44.9
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 3.5e-26 122.5 184 46.2
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 6.0e-26 121.7 189 58.2
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 1.0e-25 120.9 173 61.8
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.0e-25 120.9 186 45.2
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 1.7e-25 120.2 126 58.7
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.7e-25 120.2 126 60.3
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 2.3e-25 119.8 189 47.1
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 2.3e-25 119.8 188 51.1
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 3.0e-25 119.4 126 60.3
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 3.0e-25 119.4 139 74.8
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 3.0e-25 119.4 186 43.5
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 5.1e-25 118.6 193 49.7
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.1e-24 117.5 186 50.5
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 1.5e-24 117.1 188 43.6
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 1.5e-24 117.1 198 53.5
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 4.3e-24 115.5 190 42.6
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 5.6e-24 115.2 126 57.9
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 9.6e-24 114.4 185 47.6
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.2e-23 114.0 180 45.6
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 1.6e-23 113.6 127 57.5
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 1.6e-23 113.6 127 57.5
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.6e-23 113.6 188 50.5
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 2.8e-23 112.8 126 57.1
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 3.6e-23 112.5 197 56.9
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 4.7e-23 112.1 149 71.8
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 1.1e-22 110.9 105 63.8
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 4.0e-22 109.0 127 54.3
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.0e-22 109.0 78 74.4
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 5.2e-22 108.6 177 54.8
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 6.9e-22 108.2 181 43.1
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 2.0e-21 106.7 187 43.9
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 4.4e-21 105.5 108 59.3
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 1.3e-20 104.0 127 55.1
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 3.2e-19 99.4 139 45.3
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 1.2e-18 97.4 185 48.6
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.0e-17 94.4 79 70.9
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 8.7e-17 91.3 190 36.8
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.9e-16 90.1 115 51.3
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 2.1e-15 86.7 87 59.8
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 2.1e-15 86.7 126 62.7
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 1.6e-10 70.5 81 87.7
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 5.6e-08 62.0 192 46.9
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 1.6e-07 60.5 177 35.6


User provided reference genes

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