Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.4e-184 649.4 319 100.0
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 4.5e-151 538.1 322 84.2
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 6.8e-123 444.5 321 69.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.6e-119 433.3 320 67.8
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 9.0e-115 417.5 321 67.6
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 7.6e-114 414.5 319 63.9
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 9.9e-114 414.1 321 67.0
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 6.0e-111 404.8 321 64.2
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 6.6e-110 401.4 322 63.4
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.8e-108 396.0 320 62.8
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 3.6e-108 395.6 322 61.5
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.1e-107 394.0 323 63.8
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 4.5e-106 388.7 320 62.2
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.2e-105 386.3 322 62.1
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 3.8e-105 385.6 321 62.6
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.1e-104 384.0 322 63.4
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.1e-104 381.3 320 61.2
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 4.6e-103 378.6 321 62.3
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 6.0e-103 378.3 320 61.9
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 6.0e-103 378.3 322 60.2
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 7.9e-103 377.9 322 60.9
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 3.9e-102 375.6 322 58.4
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 6.7e-102 374.8 322 59.0
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.5e-101 373.6 320 60.6
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.9e-101 373.2 322 58.7
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 2.5e-101 372.9 321 59.2
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 4.3e-101 372.1 321 60.4
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 9.6e-101 370.9 322 60.2
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.3e-100 370.5 322 58.7
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 4.8e-100 368.6 322 59.3
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 6.2e-100 368.2 322 60.2
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.4e-99 367.1 369 55.3
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.4e-99 366.3 330 59.7
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 3.1e-99 365.9 320 57.8
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 3.1e-99 365.9 321 59.8
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 5.3e-99 365.2 321 57.0
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 6.9e-99 364.8 321 60.1
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 1.5e-98 363.6 321 57.6
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 1.5e-98 363.6 323 57.6
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 7.6e-98 361.3 320 59.7
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 7.6e-98 361.3 322 56.5
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 4.9e-97 358.6 321 56.7
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 7.1e-96 354.8 321 55.5
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 7.9e-95 351.3 320 55.3
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 1.0e-94 350.9 322 57.5
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 2.3e-94 349.7 322 57.5
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 2.3e-94 349.7 276 65.2
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.3e-94 349.7 321 57.9
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 5.1e-94 348.6 321 55.1
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.5e-93 347.1 323 57.3
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.6e-92 343.6 322 58.4
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 2.1e-92 343.2 321 54.8
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.7e-92 342.4 322 57.5
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 8.2e-92 341.3 320 59.7
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 4.1e-91 339.0 321 57.3
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 6.9e-91 338.2 321 57.0
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 9.0e-91 337.8 327 56.0
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.5e-90 337.0 319 56.4
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.5e-90 337.0 322 55.9
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.5e-90 337.0 319 53.6
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 4.5e-90 335.5 319 55.8
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.8e-90 335.1 396 49.2
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 5.8e-90 335.1 319 55.8
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.0e-89 334.3 321 54.8
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.7e-89 333.6 319 54.2
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 9.3e-88 327.8 319 53.6
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 4.6e-87 325.5 320 55.0
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 1.0e-86 324.3 321 52.3
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.3e-86 323.2 319 51.4
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.3e-86 323.2 325 51.7
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 5.1e-86 322.0 320 52.2
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 6.7e-86 321.6 321 52.6
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.5e-85 319.7 440 43.9
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 3.3e-85 319.3 325 52.3
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 5.7e-85 318.5 320 51.6
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 2.8e-84 316.2 320 50.6
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 2.8e-84 316.2 325 52.0
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 8.2e-84 314.7 320 50.9
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.4e-83 313.9 319 50.8
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 1.4e-83 313.9 331 51.7
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.8e-83 313.5 322 50.9
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.4e-83 313.2 319 50.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 3.4e-82 309.3 297 55.6
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 3.4e-82 309.3 322 53.1
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 5.9e-82 308.5 324 49.4
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 2.9e-81 306.2 319 50.5
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.1e-80 304.3 319 49.5
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 7.2e-80 301.6 236 64.0
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 1.2e-79 300.8 319 49.2
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 6.7e-78 295.0 292 53.8
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 8.8e-78 294.7 347 49.3
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.5e-77 293.1 322 50.6
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 2.4e-75 286.6 253 60.1
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 5.3e-75 285.4 274 54.4
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 2.6e-74 283.1 320 50.3
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 3.4e-74 282.7 319 48.3
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.4e-74 282.7 330 48.5
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 7.7e-74 281.6 285 54.4
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 2.5e-72 276.6 280 54.6
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 6.1e-71 271.9 228 61.8
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 1.5e-69 267.3 328 43.3
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.4e-69 265.8 263 52.5
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.7e-68 263.8 293 49.8
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 9.1e-67 258.1 308 45.1
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 2.0e-66 256.9 339 45.4
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.9e-66 255.4 273 47.6
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 8.5e-65 251.5 338 42.6
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.9e-64 250.4 231 55.8
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 2.5e-64 250.0 319 45.8
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.6e-63 246.1 394 40.1
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.3e-60 237.7 332 41.3
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 1.2e-58 231.1 233 48.5
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.6e-58 230.7 329 38.3
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 3.6e-55 219.5 167 64.1
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 4.4e-53 212.6 320 40.6
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 5.7e-53 212.2 326 39.0
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 9.8e-53 211.5 227 50.2
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.2e-50 204.5 336 39.6
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 1.4e-46 191.0 249 43.4
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 2.6e-45 186.8 196 48.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 5.7e-45 185.7 243 49.0
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 5.7e-45 185.7 320 37.8
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.2e-18 98.2 55 80.0
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 3.4e-13 80.1 53 69.8
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 3.4e-13 80.1 53 69.8
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.3e-09 67.4 49 65.3
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 1.9e-08 64.3 49 65.3


User provided reference genes

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