Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0421 Trochodendron aralioides HOM05D000010 ORTHO05D016350 1.1e-74 283.1 139 100.0
TAR627G0208 Trochodendron aralioides HOM05D000010 ORTHO05D016350 7.5e-74 280.4 139 98.6
TAR374G1709 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.2e-73 278.9 139 97.8
TAR626G0405 Trochodendron aralioides HOM05D000010 ORTHO05D016350 5.3e-72 274.2 139 97.1
TAR628G1065 Trochodendron aralioides HOM05D000010 ORTHO05D016350 5.3e-72 274.2 139 97.1
TAR371G0573 Trochodendron aralioides HOM05D000010 ORTHO05D016350 3.5e-71 271.6 139 95.7
TAR636G3111 Trochodendron aralioides HOM05D000010 ORTHO05D016350 4.5e-71 271.2 139 95.0
TAR629G0707 Trochodendron aralioides HOM05D000010 ORTHO05D000302 8.0e-68 260.4 139 94.2
TAR371G0989 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.3e-67 258.8 141 92.2
TAR623G0650 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.6e-66 255.4 127 98.4
TAR625G1362 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.6e-66 255.4 127 98.4
TAR371G1259 Trochodendron aralioides HOM05D000010 ORTHO05D000302 2.4e-40 169.1 151 63.6
Aqoxy3G00288 Aquilegia oxysepala HOM05D000010 ORTHO05D000302 6.6e-30 134.4 140 52.9
QL10p025405 Quercus lobata HOM05D000010 ORTHO05D000302 3.3e-29 132.1 158 50.0
vmacro16447 Vaccinium macrocarpon HOM05D000010 ORTHO05D000302 9.5e-29 130.6 161 50.3
Potri.015G046800 Populus trichocarpa HOM05D000010 ORTHO05D000302 1.6e-28 129.8 156 53.8
Rhsim12G0143200 Rhododendron simsii HOM05D000010 ORTHO05D000302 6.2e-28 127.9 165 52.1
Dinv28106 Davidia involucrata HOM05D000010 ORTHO05D000302 1.8e-27 126.3 158 51.3
GSVIVG01008291001 Vitis vinifera HOM05D000010 ORTHO05D000302 3.1e-27 125.6 162 48.1
CSS0012261 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 8.9e-27 124.0 156 50.6
Nn4g23853 Nelumbo nucifera HOM05D000010 ORTHO05D016350 2.0e-26 122.9 147 54.4
Sabra12G0040000 Salix brachista HOM05D000010 ORTHO05D000302 2.6e-26 122.5 151 48.3
Glyma.07G092000 Glycine max HOM05D000010 ORTHO05D000302 1.7e-25 119.8 164 43.9
Potri.012G056300 Populus trichocarpa HOM05D000010 ORTHO05D000302 2.4e-24 115.9 142 49.3
Sabra15G0038900 Salix brachista HOM05D000010 ORTHO05D000302 2.4e-24 115.9 154 50.0
Manes.01G011200 Manihot esculenta HOM05D000010 ORTHO05D000302 5.4e-24 114.8 166 45.8
Hma1.2p1_0653F.1_g196270 Hydrangea macrophylla HOM05D000010 ORTHO05D000302 1.6e-23 113.2 154 50.0
VMungo0464G0988 Vigna mungo HOM05D000010 ORTHO05D000302 2.7e-23 112.5 166 44.0
Actinidia18932 Actinidia chinensis HOM05D000010 ORTHO05D000302 3.5e-23 112.1 140 50.0
Lj9A426T58 Lonicera japonica HOM05D000010 ORTHO05D000302 1.0e-22 110.5 174 47.1
Phvul.004G156700 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 1.3e-22 110.2 159 44.7
HanXRQChr16g0516661 Helianthus annuus HOM05D000010 ORTHO05D000302 3.9e-22 108.6 141 45.4
Lsat_1_v5_gn_2_83520 Lactuca sativa HOM05D000010 ORTHO05D000302 3.9e-22 108.6 140 45.7
Peaxi162Scf00634g00032 Petunia axillaris HOM05D000010 ORTHO05D000302 6.6e-22 107.8 162 49.4
Dinv15679 Davidia involucrata HOM05D000010 ORTHO05D000302 1.5e-21 106.7 168 45.8
Duzib205G0543 Durio zibethinus HOM05D000010 ORTHO05D000302 4.3e-21 105.1 158 46.8
Lj2g0006796 Lotus japonicus HOM05D000010 ORTHO05D000302 4.3e-21 105.1 168 43.5
Manes.05G112755 Manihot esculenta HOM05D000010 ORTHO05D000302 4.3e-21 105.1 166 45.2
Medtr6g084430 Medicago truncatula HOM05D000010 ORTHO05D000302 5.6e-21 104.8 164 43.9
Ciclev10023578m.g Citrus clementina HOM05D000010 ORTHO05D000302 1.2e-20 103.6 170 45.9
Duzib068G0771 Durio zibethinus HOM05D000010 ORTHO05D000302 1.6e-20 103.2 157 44.6
Actinidia39831 Actinidia chinensis HOM05D000010 ORTHO05D000302 2.8e-20 102.4 153 50.3
Duzib084G0434 Durio zibethinus HOM05D000010 ORTHO05D000302 2.8e-20 102.4 163 46.6
Atru.chr9.856 Acer truncatum HOM05D000010 ORTHO05D000302 3.6e-20 102.1 168 44.6
Cc04_g07090 Coffea canephora HOM05D000010 ORTHO05D000302 4.7e-20 101.7 159 48.4
TPR.G28224 Trifolium pratense HOM05D000010 ORTHO05D000302 8.1e-20 100.9 166 42.2
Actinidia19836 Actinidia chinensis HOM05D000010 ORTHO05D000302 1.4e-19 100.1 144 47.9
Hund10249 Selenicereus undatus HOM05D000010 ORTHO05D000302 1.4e-19 100.1 162 44.4
Lalb_Chr22g0353101 Lupinus albus HOM05D000010 ORTHO05D000302 1.2e-18 97.1 162 43.2
Psat1g037400 Pisum sativum HOM05D000010 ORTHO05D000302 2.0e-18 96.3 171 40.4
Oeu031916.1 Olea europaea HOM05D000010 ORTHO05D000302 5.8e-18 94.7 129 50.4
Haze_18681 Corylus avellana HOM05D000010 ORTHO05D000302 9.9e-18 94.0 160 42.5
Gorai.006G060900 Gossypium raimondii HOM05D000010 ORTHO05D000302 9.9e-18 94.0 163 42.9
PSO478G0242 Papaver somniferum HOM05D000010 ORTHO05D000302 9.9e-18 94.0 170 41.8
CiPaw.16G086300 Carya illinoinensis HOM05D000010 ORTHO05D000302 1.3e-17 93.6 177 44.6
Gohir.A09G047900 Gossypium hirsutum HOM05D000010 ORTHO05D000302 1.3e-17 93.6 161 41.0
EL10Ac5g11071 Beta vulgaris HOM05D000010 ORTHO05D000302 1.7e-17 93.2 175 39.4
Glyma.05G234200 Glycine max HOM05D000010 ORTHO05D000302 1.7e-17 93.2 160 43.8
Nn3g17854 Nelumbo nucifera HOM05D000010 ORTHO05D000302 1.7e-17 93.2 165 47.9
CiPaw.15G131000 Carya illinoinensis HOM05D000010 ORTHO05D000302 3.8e-17 92.0 170 41.2
Gohir.D09G049100 Gossypium hirsutum HOM05D000010 ORTHO05D000302 3.8e-17 92.0 162 42.0
COL.COLO4_11304 Corchorus olitorius HOM05D000010 ORTHO05D000302 6.4e-17 91.3 174 38.5
Oeu058034.1 Olea europaea HOM05D000010 ORTHO05D000302 1.4e-16 90.1 129 48.8
Phvul.002G316500 Phaseolus vulgaris HOM05D000010 ORTHO05D000302 2.4e-16 89.4 156 46.2
Prupe.5G221600 Prunus persica HOM05D000010 ORTHO05D000302 4.2e-16 88.6 182 42.3
Solyc12g036480.2 Solanum lycopersicum HOM05D000010 ORTHO05D000302 5.4e-16 88.2 161 46.0
PSO017G4743 Papaver somniferum HOM05D000010 ORTHO05D000302 1.6e-15 86.7 167 38.9
Sopen12g017030 Solanum pennellii HOM05D000010 ORTHO05D000302 1.6e-15 86.7 166 45.2
CSS0047314 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 2.1e-15 86.3 153 39.9
Lalb_Chr14g0371141 Lupinus albus HOM05D000010 ORTHO05D000302 6.0e-15 84.7 170 41.2
MD06G1216500 Malus domestica HOM05D000010 ORTHO05D000302 6.0e-15 84.7 200 37.5
Sed0002630 Sechium edule HOM05D000010 ORTHO05D000302 1.0e-14 84.0 151 39.1
PGSC0003DMG400005384 Solanum tuberosum HOM05D000010 ORTHO05D000302 5.1e-14 81.6 169 43.2
TWI15G1245 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 1.5e-13 80.1 180 39.4
TWI81G0876 Tripterygium wilfordii HOM05D000010 ORTHO05D000302 1.5e-13 80.1 160 41.2
Cpa.g.sc3.509 Carica papaya HOM05D000010 ORTHO05D000302 2.5e-13 79.3 173 39.3
Nitab4.5_0012710g0010 Nicotiana tabacum HOM05D000010 ORTHO05D000302 4.3e-13 78.6 154 45.5
CSS0026185 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000302 9.6e-13 77.4 152 36.2
MBI16_g23780_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000302 1.3e-12 77.0 91 49.5
MD14G1226900 Malus domestica HOM05D000010 ORTHO05D000302 1.3e-12 77.0 202 38.6
Glyma.08G041500 Glycine max HOM05D000010 ORTHO05D000302 2.1e-12 76.3 150 40.0
Sed0007039 Sechium edule HOM05D000010 ORTHO05D000302 1.1e-11 73.9 141 41.8
Nitab4.5_0007985g0010 Nicotiana tabacum HOM05D000010 ORTHO05D000302 6.9e-11 71.2 157 45.2
Nitab4.5_0000208g0310 Nicotiana tabacum HOM05D000010 ORTHO05D000302 1.2e-10 70.5 157 40.1
Nitab4.5_0001194g0040 Nicotiana tabacum HOM05D000010 ORTHO05D000302 1.2e-10 70.5 156 44.9
Glyma.09G184100 Glycine max HOM05D000010 ORTHO05D000302 4.4e-10 68.6 154 36.4
ClCG06G014790 Citrullus lanatus HOM05D000010 ORTHO05D000302 2.4e-08 62.8 182 35.2
MELO3C017308.2 Cucumis melo HOM05D000010 ORTHO05D000302 2.4e-08 62.8 181 35.9
CsaV3_1G003840 Cucumis sativus L. HOM05D000010 ORTHO05D000302 4.2e-08 62.0 182 35.7


User provided reference genes

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