Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 3.4e-109 398.3 193 100.0
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.2e-50 203.8 190 56.3
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 1.1e-30 137.5 191 46.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.0e-28 128.6 193 44.6
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 8.6e-28 127.9 186 44.1
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 8.6e-28 127.9 193 44.6
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 3.3e-27 125.9 202 42.1
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.3e-27 125.6 195 44.6
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.3e-27 125.6 178 43.3
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 7.3e-27 124.8 203 43.8
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 9.5e-27 124.4 194 42.3
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.0e-25 119.0 193 40.4
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 6.8e-25 118.2 186 42.5
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 5.8e-24 115.2 193 39.4
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 9.8e-24 114.4 195 40.5
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 9.8e-24 114.4 208 38.5
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.1e-22 110.9 200 39.5
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.1e-22 110.9 202 39.1
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.4e-22 110.5 191 40.3
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 2.4e-22 109.8 203 35.5
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 2.4e-22 109.8 197 42.1
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 3.2e-22 109.4 201 41.3
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.2e-22 109.4 188 37.8
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.1e-22 109.0 219 34.7
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 5.4e-22 108.6 202 38.6
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 5.4e-22 108.6 202 36.6
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 7.0e-22 108.2 191 39.8
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 9.2e-22 107.8 187 37.4
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 2.7e-21 106.3 190 40.0
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 2.7e-21 106.3 199 39.2
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 3.5e-21 105.9 202 36.6
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.5e-21 105.9 204 38.2
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.3e-20 103.2 206 36.9
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 3.0e-20 102.8 190 38.4
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 3.9e-20 102.4 188 36.7
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 5.0e-20 102.1 197 35.5
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 8.6e-20 101.3 189 38.1
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 8.6e-20 101.3 195 35.9
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.9e-19 100.1 208 35.1
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.9e-19 100.1 188 43.1
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.9e-19 100.1 189 38.1
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.3e-19 99.0 181 38.7
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 7.3e-19 98.2 194 35.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 9.5e-19 97.8 208 35.6
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.2e-18 97.4 199 36.2
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-18 97.1 189 38.1
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.6e-18 97.1 217 33.2
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.6e-18 95.9 187 37.4
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 8.1e-18 94.7 191 33.0
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.1e-17 94.4 193 36.3
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.1e-17 94.4 191 38.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.8e-17 93.6 206 35.0
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.3e-17 93.2 186 36.6
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 2.3e-17 93.2 186 37.6
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.3e-17 93.2 183 39.3
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.0e-17 92.4 201 36.8
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.0e-17 92.4 195 35.4
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.2e-17 92.0 198 37.4
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 6.8e-17 91.7 188 36.2
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.5e-16 90.5 195 37.9
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.0e-16 90.1 202 36.1
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.4e-16 89.4 185 35.7
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 3.4e-16 89.4 196 36.7
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 5.8e-16 88.6 190 35.8
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 5.8e-16 88.6 194 36.6
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 9.8e-16 87.8 198 35.4
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.3e-15 87.4 188 37.8
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.3e-15 87.4 178 38.8
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.7e-15 87.0 205 35.6
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 1.7e-15 87.0 189 37.0
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.7e-15 87.0 183 35.0
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.2e-15 86.7 193 37.3
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 2.9e-15 86.3 190 34.7
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 2.9e-15 86.3 190 34.7
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.7e-15 85.9 185 34.6
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.7e-15 85.9 189 36.0
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.7e-15 85.9 204 33.8
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 4.9e-15 85.5 204 33.8
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 4.9e-15 85.5 189 36.5
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 4.9e-15 85.5 182 34.1
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 6.4e-15 85.1 204 30.9
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 8.3e-15 84.7 214 33.2
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 8.3e-15 84.7 186 35.5
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.1e-14 84.3 192 34.4
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.1e-14 84.3 210 33.3
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 1.4e-14 84.0 188 33.0
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 2.4e-14 83.2 188 34.0
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 2.4e-14 83.2 181 36.5
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 3.2e-14 82.8 189 36.0
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 3.2e-14 82.8 180 33.9
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 4.1e-14 82.4 189 35.4
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 4.1e-14 82.4 194 33.0
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 5.4e-14 82.0 186 35.5
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 5.4e-14 82.0 188 34.0
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 5.4e-14 82.0 186 35.5
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 5.4e-14 82.0 190 33.7
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 9.2e-14 81.3 194 34.5
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 9.2e-14 81.3 194 34.5
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 9.2e-14 81.3 191 31.9
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.2e-13 80.9 191 33.5
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 2.7e-13 79.7 187 33.7
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 2.7e-13 79.7 187 33.7
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.7e-13 79.7 182 37.4
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 3.5e-13 79.3 188 34.0
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 3.5e-13 79.3 185 34.1
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.6e-13 79.0 191 31.9
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 6.0e-13 78.6 201 30.3
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.7e-12 77.0 192 31.2
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 2.3e-12 76.6 184 35.9
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 3.0e-12 76.3 194 36.1
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.1e-11 74.3 173 35.8
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.9e-11 73.6 204 29.9
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 2.5e-11 73.2 176 35.8
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 9.5e-11 71.2 191 31.9
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.6e-10 70.5 182 32.4
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 2.8e-10 69.7 227 28.6
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 3.6e-10 69.3 106 43.4
Zm00001eb313970 Zea mays HOM05D041184 ORTHO05D037194 1.2e-08 64.3 203 32.5
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 2.6e-08 63.2 184 32.6
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 4.4e-08 62.4 199 31.2
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 5.8e-08 62.0 120 38.3
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.9e-07 59.7 186 31.2
PSO386G0064 Papaver somniferum HOM05D005897 ORTHO05D007128 2.9e-07 59.7 194 28.9
Aqoxy7G00993 Aquilegia oxysepala HOM05D005897 ORTHO05D007128 1.4e-06 57.4 218 26.1
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 1.9e-06 57.0 182 30.8
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 2.4e-06 56.6 194 30.4


User provided reference genes

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